Thermincola potens: TherJR_0963
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Entry
TherJR_0963 CDS
T01226
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tjr
Thermincola potens
Pathway
tjr03030
DNA replication
tjr03410
Base excision repair
tjr03420
Nucleotide excision repair
tjr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tjr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TherJR_0963
03410 Base excision repair
TherJR_0963
03420 Nucleotide excision repair
TherJR_0963
03440 Homologous recombination
TherJR_0963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tjr03032
]
TherJR_0963
03400 DNA repair and recombination proteins [BR:
tjr03400
]
TherJR_0963
Enzymes [BR:
tjr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TherJR_0963
DNA replication proteins [BR:
tjr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
TherJR_0963
DNA repair and recombination proteins [BR:
tjr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
TherJR_0963
NER (nucleotide excision repair)
GGR (global genome repair) factors
TherJR_0963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
Taq-exonuc
HHH_2
DNA_pol_A_exo1
HHH
Motif
Other DBs
NCBI-ProteinID:
ADG81829
UniProt:
D5XDV8
LinkDB
All DBs
Position
984780..987440
Genome browser
AA seq
886 aa
AA seq
DB search
MTQGKFIIIDGNSLVYRAFYALPLLKTTTGVYTNAVYGFTTMLMKVLNEEKPACLAIAFD
KGKTTFRNEHFEDYKGHRKATPDELKPQFPLVKEIVRAFRIPVYEIEGYEADDIIGTVSL
KAEEMGYETVIVTGDRDALQLVSPKTRVMLTKKGISEMELYDENKVAERYGLKPAQIIDM
KGLMGDTSDNIPGVPGIGEKTAAKLVREYGSVEELLAQRGTVAGKLREKLEQYAEQALLS
KKLATIIRHVPIEIDLRECVVEEPDYAKLLELGRSLEFKALTKLAQEKAPEQPEKLSEPV
DEAKQLQINGEYRQYNFDEALASITRFVEQKKDLALVLQTSNQDPWSAGILGLAWSAEPG
SGGYLAGEELQPADKLTRILDTVLWTKGWVCFHDAKRTDILLRRLGNKPVRAGFDTMLAA
YLLDPSVSNLDLAALSIKYLGQELSPGEDYRSFCAQADIILRLVPVLHEKLAELNMLDLY
FDVEMPLLHILADMEFSGVKLDKEYLEAMSVDLSTEIDRITGDIYRLAGEEFNINSTRQL
GTILFEKLGLPVIKKTKTGYSTDVEVLETLAERHEIVARVLHYRQLVKLKSTYVDGLIPL
INPVTGKVHTTFNQTVTATGRLSSTEPNLQNIPIRMEEGRRIRKAFVPSEPGWIILSADY
SQIELRILAHLSGDERFVQAFRNDEDIHTRTAAEVFGVSLEEVTGEMRSRAKAVNFGIVY
GISDFGLAKNISVSRKEARQYIENYFARYAGIKKYLEETVRLAREQGYVTTLLNRRRYLP
DILSPNRNIRSFGERTAMNTPIQGSAADIIKLAMVRVADCLKKEGLKARMLLQVHDELIF
EAPPEELPKVTGIVRECMENTVKLTVPLKVDMKKGFNWYDMEKIND
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgacccagggcaagtttattattatagacggaaacagcctggtttaccgggctttttac
gctttaccgctcttaaaaaccactacgggcgtttatacaaatgccgtatacggcttcaca
accatgctgatgaaggttttgaacgaagaaaaaccagcctgcctggccatagcttttgat
aaggggaaaactacttttcgcaatgagcattttgaagattacaaggggcaccggaaagca
acacctgacgaactgaagccccagtttcccctggtgaaagaaattgtgcgcgcttttcgc
attcccgtttacgaaatagaaggttatgaagctgatgatataataggtacagtttccttg
aaagcagaagaaatgggatatgaaactgtaattgttacgggcgacagggacgcgttgcag
ttggtttcacccaaaacaagagttatgttaaccaaaaaaggcatatcagaaatggaactt
tacgacgaaaacaaggtggccgaacgttacgggctcaaacctgcgcagataatagacatg
aaaggattaatgggcgatacttccgataatatccccggggtgccgggtattggagaaaaa
acggccgccaaactggtcagagaatatggctccgtggaagaactgctggcccaaagaggt
acagttgccggaaaactccgggaaaaactcgagcagtacgcggaacaggctcttctcagc
aaaaaactggctacgattatcaggcatgtgcctatagagatagatttacgggagtgtgtg
gtggaagaacctgactacgcgaaacttttggagttgggacggagtttagaatttaaggct
ttgacaaagctggcccaggaaaaggcgccggaacagccggaaaaattatctgaacctgtt
gatgaagccaagcaattgcaaattaatggcgagtacagacagtataactttgacgaggct
ttagcttctataacccgatttgtggaacagaaaaaagacctggcccttgttttacaaacc
tcaaaccaggacccctggtctgccggcattcttggattggcctggtcagccgaaccgggg
agcggcgggtatcttgccggtgaggaactgcagcctgcagataaacttacccgtatcctg
gatacggtcctttggacgaagggctgggtatgcttccatgatgccaaaaggaccgatatc
ttactgcgacgtttaggcaacaagcctgttcgcgcaggatttgacaccatgttggcggct
taccttttggatccttctgtttccaacctcgatttagctgctttatctataaagtatttg
gggcaggagttgagccctggagaagactacaggtctttttgtgcccaggccgatattata
ttgcggctggtacctgtactgcatgagaagctggccgagctgaacatgcttgacctgtat
tttgatgtggaaatgcccctcctgcatattctggccgatatggaattcagcggggtcaag
ctggacaaggaatacctggaagccatgtctgtggatttaagtacggaaatcgaccggatt
actggggatatttacaggctggccggggaggaattcaacatcaattctacccggcagttg
gggaccattctttttgaaaaactgggtttaccggtcattaaaaagacgaaaacagggtat
tcgacagacgttgaggtcctggaaaccctggcggaaaggcatgaaattgtggccagggtg
cttcattaccgccagttggtcaagctgaagtcaacctatgtggacgggttaattcctttg
ataaatcccgttacgggaaaggtccataccacctttaaccagacggttacggcaacgggg
cggttgagcagtactgaaccaaacctgcagaacatacctatccgtatggaagaaggccgc
aggatcaggaaggccttcgtaccttccgaaccaggctggataatccttagtgcagattat
tcccagatcgagctcaggattctggcgcacctttccggggatgaaagatttgtccaggct
ttcagaaatgacgaggatattcatactcggactgccgcggaagtattcggcgtgtctttg
gaggaagtaaccggggagatgcgcagccgggccaaggctgttaacttcggaattgtttac
ggcatcagtgattttgggctggcgaaaaatatctctgtaagccgaaaagaagccaggcag
tatattgaaaactactttgcccggtacgcgggtataaaaaaatacctggaggagacagtc
aggttggccagggaacagggatatgtaaccaccttgctcaacaggcgccgctacctgccc
gacatcctaagtcccaaccggaatattcgcagctttggggagcgcactgccatgaacact
ccaattcagggcagtgccgccgatataataaaactggccatggtccgggttgccgattgc
ctcaaaaaagaaggcttaaaagcccgcatgctgctgcaggttcacgacgaacttattttt
gaggcgccgcctgaagaacttccaaaagttacaggcattgtaagggaatgtatggagaac
accgttaaattaacggttccattaaaagtagatatgaaaaaggggttcaactggtacgac
atggagaaaattaacgattaa
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