Thermincola potens: TherJR_0985
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Entry
TherJR_0985 CDS
T01226
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
tjr
Thermincola potens
Brite
KEGG Orthology (KO) [BR:
tjr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tjr03000
]
TherJR_0985
Transcription factors [BR:
tjr03000
]
Prokaryotic type
Helix-turn-helix
Other families
TherJR_0985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
HTH_8
Sigma54_activ_2
PAS
AAA_5
GAF
Mg_chelatase
AAA_2
AAA
HTH_23
AAA_3
PAS_4
PAS_8
HTH_29
HTH_30
DUF815
AAA_16
bpMoxR
HTH_28
TsaE
PAS_9
Diguanyl_cycl_sensor
DUF134
Motif
Other DBs
NCBI-ProteinID:
ADG81851
UniProt:
D5XDY0
LinkDB
All DBs
Position
1008036..1010021
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AA seq
661 aa
AA seq
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MWTVNRKLTRVYRSWEKFISNYEIEPYVIRPLIANSWHRCLRMKVDPMSPLDHINLLSPS
QINKHIERRKTLIGAAMPFMSHLYNFVKGSETLVCLADDNGIILDVLRDPVIHYQTKHIC
TEVGSDWSESICGTNSIGTCLFEKKPVQITATEHYCKVLHGLTGSAAPIFSPEGELLGVL
SIIGLCNNVHAHTLGMVVAAVKAIENQLVSQKKSYELLLAYKKVTAVIETMDEGLIAIEA
NRKITQLNSEGAKILQVNREDCIGRSALDVFGQSFPLLEALQNEVEFTDKEFYIETPAGG
TRFTSTVKMIRDETGQVTGMMATLREMQSVHKLVNKMVGAQATFTFDDIIGNDPQLHTLI
QRAKRVARSSSTILLQGSSGTGKEMFAQAIHNASGRRGGPFIVINCGAIPRELVESELFG
YEEGAFTGAKKGGRPGKFELASGGTIFLDEIGDMPLDIQASLLRVLQERQVTRIGGQKSI
PVNTRVIAATNKNLAEEVEKGNFRLDLYYRLNVINLVIPSLRDRPRDIPYLAQYFVNKIS
RRLGITPPIIAPDFYECLSRYDWPGNVRELENVIEQALNIVETDILIPEHLPARIYSPQN
NRQINPEQKINLKSAEAEIIRDALDKCRWNISRAASTLGIGRNTLYRKIKRYNLCSKRQK
G
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
ttgtggaccgtaaatcgcaaactcaccagggtttatcggtcctgggaaaagtttatttcc
aattatgaaatagaaccttatgttatcagaccgctgatagcaaattcctggcatcgctgc
ctcaggatgaaggtagatccaatgtctcccctggaccacattaatcttttgagtccgtct
cagataaacaaacacattgaacggcgaaaaacactgattggtgcagccatgccctttatg
agccacctgtataattttgtcaaaggttccgaaactctggtctgccttgcggacgacaac
ggcatcattctggatgtactgcgtgatccggtaattcactaccagacaaaacacatttgc
accgaggtaggttctgactggagtgagtccatctgcgggaccaacagtatcggcacttgc
ctttttgaaaaaaaaccggtccagataacggccactgaacattattgtaaagtattacac
gggctgaccggttctgcggctccgattttcagtcccgagggtgagcttttgggagtgctt
tccattatagggctttgtaataatgtccatgctcacactctggggatggtggtagcagcc
gtcaaggccatagaaaaccaactggtcagtcagaaaaaatcctatgagctcttgctggcc
tacaaaaaggtaactgcagttattgaaacaatggatgagggactgattgccattgaggcc
aaccggaaaataacccagttgaattcagaaggtgccaagatattgcaggtaaaccgggaa
gattgcatcggcaggtctgctcttgatgtcttcggtcagagttttccactactggaagct
ctgcaaaatgaagtggagtttacagataaggagttttatatcgaaacaccggccggtggt
acgcgatttacgtcaactgtgaagatgattcgtgatgaaacaggccaggtaacagggatg
atggccactttacgggagatgcaaagcgtacacaagcttgttaacaaaatggtaggggct
caggccacctttacttttgacgatattattggcaatgaccctcaattgcatactcttata
cagcgagcgaaaagagtcgcccggagcagttcaactattctcttacagggatccagcggt
acaggcaaggaaatgtttgcccaggcaatacataatgccagcgggcgccgtggaggtcct
ttcatcgtaattaactgcggtgccattcccagggagctggtggaaagtgaattattcggg
tatgaagaaggagcattcacaggtgccaagaaaggaggccggcccggtaaatttgaactg
gcctccggaggtactattttcctggatgaaataggagatatgcccctggatatccaggcc
agtctgctgcgagttttgcaggaacggcaggttacccggatcggcgggcagaagtccatt
cccgtaaacacccgtgttattgccgctaccaacaaaaacctggccgaagaagtggaaaaa
ggtaatttcaggcttgacctgtattacagattaaacgtaattaacctcgttattcccagt
ttgcgggaccgccccagagacattccctatctggctcagtatttcgtcaataaaatcagc
cgccgactgggcataactccccctattatcgcccctgatttctatgagtgcctttccagg
tacgactggcccggcaatgtgcgggaactggaaaacgttatcgaacaggcgcttaacatt
gtagaaaccgatatccttatacctgaacatcttcctgccagaatatattcccctcaaaac
aaccgacagataaaccccgaacaaaaaataaatctgaaaagtgctgaggccgaaataatc
agagatgcccttgataagtgccggtggaacatttccagggcggcatcaaccctggggatt
ggaagaaacacactctacaggaaaattaaacgatataatttatgcagcaaaaggcaaaag
gggtga
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