Thermincola potens: TherJR_1008
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Entry
TherJR_1008 CDS
T01226
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tjr
Thermincola potens
Brite
KEGG Orthology (KO) [BR:
tjr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tjr03400
]
TherJR_1008
DNA repair and recombination proteins [BR:
tjr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TherJR_1008
Archaeal homologous recombinant proteins
TherJR_1008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_15
SMC_N
AAA_23
AAA_21
AAA_29
CCDC113_CCDC96_CC
SbcC_Walker_B
BRE1
GAS
ABC_ATPase
N4_RNAP_helical
MukB
Motif
Other DBs
NCBI-ProteinID:
ADG81873
UniProt:
D5XE02
LinkDB
All DBs
Position
1038212..1041154
Genome browser
AA seq
980 aa
AA seq
DB search
MKIRKIRLQNIKSYVDQEITFNEGVNFISGINGAGKSTIIEAIGFALFDHHPGTIGEFLR
YGTKTGTITVEFCGIDEREYRVVRKLGTSSLWTVFDLESGGELDLHGTRDVKNWLKEAMG
IDQDMELEHLFQDIVGVPQGTFVAPFLETPSLRKKKFDAILKVEQYRDAYLNTRAAAKLL
DERMREQEKDLAVLAAEVQDYDAAKAQVQSLKTTIRELEETLQQLEGEVQNRAQKVTELE
RLKERLEKTEASLQALAATIEGLEQREKDLRENLAQAAQAYRIVRNAAPGYKAYLELQEK
AKLLEKQKREKEGLEQEVNRLKQTMAALQAAIGAKEKEAAARAADLQAEEKELNNRLAEN
AALLAKAKEKYQRIMAGQEALLRWRQSEEKLVGACAGLQDIYREITAKGQLLEGSLVQEE
AAILERLEELTPLEAVAEQLEAREKELNRSREEWAKLKERLHSLQKDSQQAADGLCPFLK
SPCQNVAGDLRGFFARQIAEVEKELDSLKETGLRLADEVKEAKAAREKVLVLRTEKKRLQ
QIQQQKEALTGEIAQLTLRFRRPDFAELLDELRKTGDLPSDELEKCCNLWNREWQDERDL
DTVLAAVEAVLEQSGTRRAAKEKDFNERLQEASNTLTRYSTEKENIIRALDQVQAKKKLL
ADDLAALEQEKKKLSDMEARVGETAGKAAAFNGVEEALENTRTAQEQRRRDYELYMENRA
TAAKKDSLERELQKLSGEIANKKDQYIRLQEEKQQLVKSFNPTAYNLEKAELDRIKQKHI
AQNQILQERKNDLQEAIERLGSLEKKLAAIKKLEEDMRRTRKTQRLLEAIRGILNNAGAP
IAKVYLENLSREANEIYRQISSENAMLEWRSDYDICLTDNFQGRERVRIFKQFSGGEQMT
AALAVRLALLKQQSQVRIGFFDEPTANLDTDRRLNLADTIPRVTGDFDQLFIISHDDTFD
SMTDNIIQIKKDTEAGSMLE
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
ttgaagattcggaaaatcaggctgcagaacattaagagttacgtggaccaggagataacc
tttaacgaaggagtgaacttcatttccgggattaacggggcaggtaaatctaccattatt
gaggctatcgggttcgctctttttgaccaccacccggggacaatcggcgaattcctccgc
tacgggacgaaaacggggacaataacggtggaattctgcggcattgatgagcgcgaatac
agggtagtccgtaaactgggtaccagttccctctggaccgtgttcgatctggaaagtggc
ggcgaacttgatctccacggaaccagggatgtgaaaaactggctgaaggaggccatgggg
attgaccaggacatggaactggagcacctgttccaggatatagtaggggtcccccagggc
acctttgtggcacctttcctggaaactccgtctttaagaaaaaagaagtttgatgccatt
ctgaaggtggagcagtacagggacgcttacttgaacacgcgggcggccgcaaagttgctg
gatgagcggatgcgcgagcaggaaaaggacctggctgtccttgctgctgaagtgcaggat
tatgatgcagccaaagcccaggtccaatcgctgaagacaacaatcagggagttggaggag
acactgcaacagttggaaggtgaagtacaaaaccgggctcaaaaagtaacggaactggaa
cggttaaaggagaggctggagaaaacggaggcgagtttgcaggccctggcggcgaccatt
gaagggctggaacagcgggaaaaggacctgagggaaaatctggcgcaggctgcccaggcc
taccggatcgtccggaatgcagcgccgggctacaaggcttacctggaactgcaggaaaag
gctaagctgctggaaaagcagaagcgggaaaaggaagggctggaacaggaagttaacagg
ttgaagcagaccatggctgcgctgcaggcagctattggggccaaagaaaaagaggcggcc
gcccgggccgcagatttgcaggccgaagagaaagagcttaataaccggttggcggagaac
gccgctctactggccaaagcaaaggaaaaatatcaaaggataatggcgggtcaggaggcg
cttctgcgttggcgacaaagcgaagagaagctggttggggcctgtgccggcctgcaggat
atttaccgtgaaataaccgccaaaggccaattgctggaggggagcctggtccaggaggaa
gccgccatattggagcggttggaagagctaactcctttggaggcggtcgccgaacaactg
gaagcccgggaaaaggaactaaaccggtcccgggaagaatgggctaagcttaaagaaaga
ctccacagtctgcagaaagacagccaacaggccgctgacggtttgtgtccgtttttaaag
agcccctgccagaatgtagcgggtgacctgagaggtttttttgccaggcagattgcggaa
gtggagaaagaacttgattccttaaaggagaccggcctccgactggccgatgaagttaag
gaagccaaagcggccagggaaaaagtactggtcctacgcactgagaaaaaaaggttgcaa
cagatacaacagcagaaagaggcactgactggagaaattgcccagttgacactccgtttt
cgccggccggattttgccgaattgttggatgaattgcggaagaccggagatttgccgtca
gatgaattggaaaagtgctgtaatctttggaacagggaatggcaggacgaaagggacttg
gacactgtgttggctgctgttgaagctgttttagagcagtctgggacacggcgggcagct
aaggaaaaggattttaacgagaggctgcaggaggcttccaatactctcacccggtattcc
acggaaaaggaaaacattatccgggcccttgaccaggtacaggccaaaaagaaactgttg
gcagacgacctggctgccctggaacaagagaagaaaaaattgtcagatatggaagcgcgg
gttggggagacagccgggaaagccgccgcattcaatggggtggaggaggccctggaaaat
accaggacggcccaggaacagcgccgccgggattatgaactgtacatggaaaaccgggcg
acagccgccaaaaaagacagcctggagcgggaactgcaaaaattatccggggaaatagcg
aacaagaaggaccaatacattaggctacaggaagaaaaacaacagcttgtcaaaagtttt
aaccctacagcctataatttggaaaaagctgagttggacaggataaagcagaaacatatt
gcccagaaccagatattgcaggaacgcaaaaatgacctgcaggaagcaatcgaaaggctg
ggtagcctggagaaaaaactggccgctataaagaagctggaggaagacatgcgccggaca
cgcaaaacccaacggcttttggaggccattcgcggtatcctgaataacgccggtgcgcca
atagccaaagtttacctggaaaacttgtcccgggaagccaacgaaatttaccggcagatt
tcttccgaaaacgccatgctcgaatggcggagtgattacgacatctgtttgacggacaac
ttccagggcagggaacgggtgcgcatttttaagcagttttccggcggggaacaaatgacg
gctgcgctggcagtaaggttagcgctactcaaacagcagtcgcaggtgcggataggtttc
tttgatgagccgacggccaacctggatactgaccggcggttgaacctggccgataccatt
cccagggtcacaggagattttgaccagttgtttattatcagtcacgatgatacctttgat
tccatgaccgataacatcatccagattaaaaaagacactgaagcgggatcaatgttggaa
tag
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