Thermincola carboxydiphila: TherJR_1391
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Entry
TherJR_1391 CDS
T01226
Name
(GenBank) Serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
tjr
Thermincola carboxydiphila
Pathway
tjr00550
Peptidoglycan biosynthesis
tjr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tjr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TherJR_1391
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tjr01002
]
TherJR_1391
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tjr01011
]
TherJR_1391
Enzymes [BR:
tjr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
TherJR_1391
Peptidases and inhibitors [BR:
tjr01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
TherJR_1391
Peptidoglycan biosynthesis and degradation proteins [BR:
tjr01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
TherJR_1391
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Peptidase_S13
Transpeptidase
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
ADG82248
UniProt:
D5XF27
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All DBs
Position
1457837..1458955
Genome browser
AA seq
372 aa
AA seq
DB search
MKRFRAGIIFFTIFLLKANTCLAWQPAVSADAAVLMDANTGQVLYAKNAHKRRPPASTTK
ILTGILALDMGNPAETVVVSPRAAAVGESSIYLSAGEKLTLDELIQGALMKSGNDACAAI
AEHIGGSIEMFSQLMNLKAKMLGAWNSNFINPHGLPAKNHYSTAYDLALIARYAMQNRRF
AEIVAQKEKEIDWYGQSWNRHLKNTNKLLWRYIWADGIKTGTTKAAGQCLVSSASKDCRK
LIAVVLKSGDRYGDSIQLFEYGFNNYYYQQVAVAGEYFGYADVKNGLYPKVQLAFKSDLG
VLVPKDRPGSLEKRLVLERKPQAPVKAGQTLGWMEVNIDRQRVGRVELVALNEVPENSLK
NRVLSWIQKIIG
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggtttcgcgcagggatcatttttttcacaatatttttgttaaaagcgaatacc
tgcctggcctggcaaccggctgtttcggccgatgctgccgtactaatggatgccaatacc
ggtcaggtattatatgccaaaaatgctcataaaagaaggccgccggccagtacaacaaaa
attctgaccggcattctcgctttggatatgggaaaccctgcagaaacagtggtagtgagc
cccagggcggccgccgtgggagagtcaagtatctacctctcggcaggcgaaaaattaacc
ctggatgaattaattcagggagctttaatgaaatcgggcaatgatgcatgtgcagccatt
gcggaacatataggcggcagcattgagatgttcagccagcttatgaatttaaaagccaaa
atgttgggggcatggaactcaaattttattaatcctcatggcctaccagctaaaaaccat
tattctacggcttatgatttagctctcattgccagatatgctatgcagaatcggcgtttt
gccgaaatagtagcccagaaagaaaaggagatagattggtacgggcagagttggaacaga
catttgaagaatacgaataagttattatggagatatatatgggctgacggtatcaaaacc
ggcaccaccaaggcggccggacagtgccttgtatcgtctgccagcaaagattgtcgtaag
ttgattgctgtcgttttaaaaagcggtgaccgttacggtgattctatacaactttttgaa
tatgggttcaataattattattaccagcaggttgctgttgccggtgaatattttggttat
gccgatgtgaaaaacggtttatatcccaaagtgcaactggcttttaaatctgacctgggc
gtacttgtacctaaggaccggccaggcagcttagaaaagcggctggttcttgaacggaaa
ccgcaagcccctgtgaaagccggacagactttgggctggatggaagtaaacattgacaga
caaagggtcggcagggtagaactggttgccttaaatgaagtaccggaaaattcactgaaa
aaccgggtgctttcatggatacagaagattattggctga
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