Thermincola potens: TherJR_1489
Help
Entry
TherJR_1489 CDS
T01226
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
tjr
Thermincola potens
Pathway
tjr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tjr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TherJR_1489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tjr03400
]
TherJR_1489
DNA repair and recombination proteins [BR:
tjr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
TherJR_1489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_14
AAA_27
Motif
Other DBs
NCBI-ProteinID:
ADG82342
UniProt:
D5XFC1
LinkDB
All DBs
Position
1557914..1560562
Genome browser
AA seq
882 aa
AA seq
DB search
MSSYTPMIQQYLEIKSQYPDAILFFRLGDFYEMFFEDAEKASKELEITLTARDGGNDKKV
PMCGVPFHAATTYIAKLINKGYNVAICEQVEDPGAAKGIVKREVIRVITPGTVLEENMLD
EKQNNFLIAVNKDDFGYGLAVADVSTGYFAVTELRGAKALNQLIDEISRLQPVECLIPDN
LVKNMDLTTEILKQVKLSLHSYSSVHFSIKNATSTLLRHFATGSLEGFGCLEMSVGISCA
GALMAFLAETQKNSLKHINKLIPYTTTSYMLLDPSTRRNLELTRTIRDSSRKGTLLWVLD
YTQTAMGGRLLKTWLEQPLTDITAIETRLDTVEELVNNVFMRGDLQKLFTEVYDLERLAG
RIAFGSANARDLIALKKSLQVLPKVKEILEKAYSPGLIQLYRQLDILEDVASLIESAIDD
NPPITLRDGGIIKKGYNEEIDRLRKASRDGKTWIAELERREKERTGIKSLKVGYNKVFGY
YIEVTRANLDAVPDDYIRKQTLANAERFITPDLKEYESLILGAEEKITQLEYELFQAVRE
KISNSTARIQQAASIVAQLDVYIAFAEAAIRNNYTKPIINDDGIIKITDGRHPVVEKFMP
EGSFVPNDTYLDCSGYRMDIITGPNMAGKSTYMRQVALIVLMAQIGSYVPASEARIGIVD
RIFTRVGASDDLATGQSTFMVEMNEVANILNNATAKSLIILDEVGRGTSTFDGLSIAWAV
AEYILDPEKIGAKTLFATHYHELTELADIYPGVQNHNIAVKEKGDDIIFLRKIIPGGADR
SYGIQVARLAGLPGEVLGKAKEILRTLEVNEDAVKTKREVAAARKKCSDGNNVIQLRMFD
EPAAGDAVAKEILSLDLLNLTPLEALNYLYKLQQKLRSSSGE
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctacacgccaatgatacagcagtaccttgaaattaaaagtcaatacccggat
gccatcttattttttcgtttaggcgatttctatgaaatgttctttgaggatgccgaaaaa
gcttccaaagaactggaaataactctcacagcccgggatgggggtaatgataaaaaggta
ccgatgtgtggcgttccttttcatgctgccactacatatattgccaagttaattaataag
ggttataatgtagccatttgcgaacaggtagaagaccccggcgctgccaaggggatcgtc
aagagagaggtaatcagggttattacgcccgggactgtcctcgaagaaaatatgctggat
gaaaaacaaaataacttcctaattgccgtaaacaaagatgatttcggttatggtctggcc
gtagctgatgtatccaccgggtattttgccgttactgaattaagaggggccaaagcgctt
aatcagttaatagacgaaatatccaggctgcaaccggtggaatgcctgataccggataac
ctggttaaaaatatggatttaactacagagattctcaaacaggttaaactttcgctacat
tcttattcatcggttcatttttctataaaaaatgccaccagtactcttttgcgccatttt
gctacgggttccctggaagggtttggttgtttggaaatgtcagtaggtatcagttgcgcc
ggggccctcatggcatttctggcggaaacgcagaaaaactccttaaaacatatcaacaaa
ttgataccttatacgaccacttcatatatgctgctggatccatctaccaggagaaatctg
gaactgaccaggaccatcagggattcgtccaggaaaggcactttactgtgggttcttgat
tacacgcaaacagctatgggcggcaggctgttaaaaacctggctggaacagcccctgact
gatataacggctatcgaaaccaggctggataccgttgaggaactggtcaataacgttttt
atgcggggtgacttgcagaaactgtttactgaagtttatgacctcgagcgtttggctggt
cggattgctttcggttcagccaatgccagggacctgattgccctgaaaaaatcactgcag
gttcttcctaaagttaaagagatacttgaaaaggcctattcaccaggtttaattcaattg
taccggcagcttgacatacttgaagacgtagcctccctaatcgaatctgctatagacgat
aacccgcctattaccttgcgggacgggggtataattaaaaaaggttataacgaagaaatt
gacagactgagaaaagccagccgggacggtaagacatggattgccgaactggaacgcagg
gaaaaggaaagaacggggattaaatcgctaaaagtcggatataacaaggtttttggttat
tacattgaggtaaccagggcaaatctggatgcagtcccggatgactatatacgcaaacaa
acgctggccaacgctgaacgctttattactcccgatttaaaagaatacgaatctctcatt
cttggagcggaagaaaagattacgcaactggaatatgaactttttcaggccgtcagggaa
aaaatcagcaattccacggcgagaattcagcaggcagcttctattgtggcccaacttgac
gtatatattgctttcgccgaagctgccataaggaacaattacaccaagcctattatcaat
gacgacggtattattaaaataaccgacggcaggcaccctgtggtggagaagttcatgcct
gagggcagttttgtccctaacgatacctatcttgattgctcaggttacaggatggacatt
attaccgggcccaatatggccggaaaatctacttacatgcgccaggtagctctaattgtg
ttaatggcccaaatcggcagctacgtgcccgcttcggaagctcggataggtatcgtagac
cggatttttacccgtgtcggcgcttctgacgacctggccacggggcagagcaccttcatg
gttgaaatgaatgaagtagccaatattttaaacaatgccacagctaaaagtctgataatt
ttggacgaagtagggcggggtacgagtacctttgacggattaagtatcgcctgggccgtg
gcagaatatattttggatcccgaaaaaatcggagccaaaaccctctttgccacacattac
catgaattgacggaattggccgatatttatccgggggtgcaaaatcataatatcgcagtc
aaagaaaaaggtgatgatattatatttctgcgtaaaatcattccgggcggggcagaccgc
agttacggcatccaggttgcccggttggcgggtttgccgggagaagtcttgggaaaagcc
aaggaaatcctccgcactttggaagttaacgaggatgcagtgaaaacgaaaagggaagta
gctgcagcgaggaaaaagtgttctgatggcaacaacgtcatccagttaaggatgtttgac
gaaccggccgccggcgatgctgtggccaaggaaatactctcgctcgaccttttaaatctc
actcccctggaagccttaaactacctttataaacttcagcagaaattaagaagctcgtca
ggggaataa
DBGET
integrated database retrieval system
