Thermincola carboxydiphila: TherJR_1767
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Entry
TherJR_1767 CDS
T01226
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
tjr
Thermincola carboxydiphila
Brite
KEGG Orthology (KO) [BR:
tjr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
tjr03012
]
TherJR_1767
Translation factors [BR:
tjr03012
]
Eukaryotic type
Elongation factors
TherJR_1767
Prokaryotic type
TherJR_1767
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
WHD_3rd_SelB
WHD_2nd_SelB
Beta-barrel_SelB
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
PduV-EutP
GTP_EFTU_D3
RsgA_GTPase
nSTAND_NTPase4
NirdL-like_HTH
HTH_Mga
SRPRB
MIB_arm
Motif
Other DBs
NCBI-ProteinID:
ADG82616
UniProt:
D5X7P6
LinkDB
All DBs
Position
complement(1816603..1818519)
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AA seq
638 aa
AA seq
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MSGKMGKHFIIGTAGHVDHGKTMLVKAMTGKDTDRLKEEKERGISIELGFAPIRLPSGIL
AGIVDVPGHERFIKNMLAGVGGMDLVLLVIAADEGVMPQTTEHLDIIKLLQVPQGIIVIS
KIDLVDADWLDLVEEEIKEAVKGTVFDGAPVFRVSSTTGEGIRELLDYIDQMAAKMKVRP
STGWPRLAIDRVFTIAGFGTVVTGTLIEGKVKVGDPLEILPKGLETRVRNIQVHGEKVNE
AYAGQRVALNLANVEVEEVRRGDVLTWPGRLKPSHRIDVKLQLLENARQLSHRARVRVHI
GTSEILARIILLDRDELNPGEVAYAQVECEEPIVAAKGDRFVIRSYSPMHTIGGGTVIDA
NPAKHKRFRPDVIEALATKEKGTPEELVIQALGTAGAELLAHEALAKAAGIPETELAPAL
ESLKKAGKIRVISVEGKQFYISDDKFQQWARDITGVLEEYHRKFPLRPGMPKEEIRSRFF
PGINNKLYNAILQVFEEEQKFTLTGDSLALFGYVPRVDPEQAKELAAVAEQFLQGEFQPP
AWKDMVFTGKDMDPEEVLNYFVNQNILVKLEDNVILHRDVFEKGKQKIIDYLKEKGEITL
AEARDLLNSSRKYILPFLNRLDKEKVTRRVEDKRILYK
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaaaaatgggcaagcatttcataatcggaaccgccggtcacgtggatcatggc
aagaccatgttggtcaaagccatgacgggaaaagacacggaccggctgaaagaggaaaaa
gaacgtggtatttcgatagaactgggttttgcgcccatccggctgcccagcggcattctg
gccggtattgtggatgttcccggtcatgaaagatttattaaaaacatgctggccggggta
ggcgggatggacctggtcctgttggtgattgccgccgacgaaggagtgatgccccaaacc
actgagcatttggatattatcaaactcctgcaggtaccgcagggtatcattgtcataagc
aagattgacctggtagatgccgactggcttgacctggtagaagaagaaatcaaggaagcc
gtcaagggtaccgtttttgacggggctcccgtgttcagggtttcttccactaccggtgaa
ggaattcgggaactcctggattatatagaccaaatggcggcaaaaatgaaggtgcggcca
tcgacggggtggcccaggctggccatcgaccgggtttttaccatagccggtttcggcacc
gttgttacgggcacactaatagagggaaaggttaaagttggcgatcccctggaaatttta
cccaaagggttggagaccagggtgcgcaatattcaggtgcatggcgaaaaagtgaacgaa
gcctatgccggtcaaagagtggctctgaatctggccaatgttgaggtggaagaagtacgg
cggggtgatgtcctgacttggccgggcaggttgaaaccaagccatagaattgatgtaaaa
ctacagttgctggaaaacgcccggcaactttcccacagggcccgggtgcgcgtgcacata
ggaacctcggaaattcttgcccggataattctactggatcgggatgagttgaatcccggg
gaagtggcttatgcccaggtagaatgtgaggaacctattgtagccgcaaaaggggaccgg
ttcgtgatcaggtcctattcccctatgcacaccattggcggtgggacggtaattgatgcc
aacccggcgaaacacaagcgtttccggcctgatgttattgaggcattggctaccaaagaa
aaaggtactccggaagaactggttattcaggctttgggcacggcaggtgcggaactcctt
gcccacgaggctttggctaaggcagccggaattccggaaacagagttggcgccggctctg
gaaagtttaaaaaaagcagggaaaatcagggtaatcagtgttgaaggcaagcagttttat
atttccgatgataagtttcagcagtgggcccgggacattaccggggttttggaagaatac
cacaggaaatttcccctgcgtccgggtatgccaaaggaagaaatccgctccaggttcttt
ccgggaataaacaataagctgtacaatgccattctgcaggttttcgaagaggaacagaaa
tttaccctgacaggcgatagcttggccctatttggttatgttccccgcgtggacccggaa
caggccaaggagttggccgccgtcgcggaacaatttttgcaaggggaattccagccgccg
gcctggaaagatatggtatttacaggtaaagatatggacccggaagaagtgttaaactac
tttgttaaccaaaatatactggttaaactggaagacaacgtgattttgcacagggatgtt
tttgaaaagggcaagcagaaaataatcgattatttaaaggaaaagggtgaaattaccctg
gccgaggcaagggacttgttgaactcctccaggaaatatatcttgcctttcttaaaccgc
ctggataaagagaaggttaccaggcgggttgaagataaaagaattctttataaataa
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