Thermincola potens: TherJR_2010
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Entry
TherJR_2010 CDS
T01226
Name
(GenBank) metal dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
tjr
Thermincola potens
Brite
KEGG Orthology (KO) [BR:
tjr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tjr03019
]
TherJR_2010
Messenger RNA biogenesis [BR:
tjr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TherJR_2010
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
HDOD
TraI_2
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
ADG82855
UniProt:
D5X8H9
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All DBs
Position
complement(2075394..2076350)
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AA seq
318 aa
AA seq
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MKTKYIADLKPGDNVDDLFFVKSVKVLNYKNKPGRYVSLILSDRTGEIAAKIWDGDDKDF
ELPEKVFVGCKGEVVEFAGTPEIQISSWELIDKAAVDSADFIPLTPLDVGNMQKDVAGMA
SSMTNPYLRQLLEELINDKELFHQYSTVPAAKAIHQAYIGGLLEHSLKTAKIASYIANLY
PAVNKELAITGALLHDIGKIEEYEVEYSIEVADKGRLLGHIVLGLEIINSLIERVPGFPE
DLRLALQHIIVSHHGTYEWQSPKRPKTIEACLVHYADAVEADMWKFSDLKEKYQGSRWSP
WDKSLERYVFLDDTATNQ
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccaaatatattgctgatttaaaaccgggagacaacgtggacgacctgtttttc
gtcaaatccgtaaaagtattgaattataaaaataagccgggtcggtatgtaagcctgata
ttaagtgacaggaccggagaaattgcagctaagatatgggacggagatgataaagacttt
gaacttccggaaaaagtgttcgtcggctgcaagggcgaggtagttgaattcgcaggtacc
cctgaaattcaaatcagttcatgggaacttatagataaggcagcagttgattctgctgac
tttataccactcacccccctggacgtcgggaacatgcaaaaagatgttgcaggtatggca
tcatcaatgactaatccttacctgagacaactgcttgaagaactgatcaatgataaggaa
ctttttcatcaatacagtactgttccggcggcaaaagcaatccaccaggcgtacataggc
ggactgttggaacacagtcttaaaacagcgaaaatagcaagttacattgcaaacttgtat
ccggccgtaaacaaagaactggccataaccggcgcattgctccatgatattgggaaaatt
gaggagtacgaagttgaatactctatcgaagttgctgataaaggaagactgttgggccat
attgttcttggccttgagataataaattcattgatagaaagagtgcctgggtttcctgaa
gacttgcgattggccctgcaacatattattgttagtcatcacggcacttatgaatggcag
tcacctaagcggccaaagacaatagaagcatgtctggttcattatgctgacgcagtcgag
gccgacatgtggaaattcagcgatttaaaagaaaaataccagggcagccggtggagtccc
tgggacaagtcactggaaaggtatgtttttctggatgataccgccaccaatcaatga
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