Thermincola potens: TherJR_2534
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Entry
TherJR_2534 CDS
T01226
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
tjr
Thermincola potens
Brite
KEGG Orthology (KO) [BR:
tjr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tjr03019
]
TherJR_2534
03009 Ribosome biogenesis [BR:
tjr03009
]
TherJR_2534
Messenger RNA biogenesis [BR:
tjr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TherJR_2534
Ribosome biogenesis [BR:
tjr03009
]
Prokaryotic type
rRNA processing factors
TherJR_2534
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
TRAM
RNase_E_G_Thio
KH_1
S1
7TMR-HDED
RD3
KH_2
KH-I_KHDC4-BBP
Methyltransf_24
Motif
Other DBs
NCBI-ProteinID:
ADG83371
UniProt:
D5XBE2
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All DBs
Position
complement(2629029..2630723)
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AA seq
564 aa
AA seq
DB search
MLKEILVNVREEETRVAVLEDKVVVEIYIERSLNQRLVGNIYKGKVENVLPGMQAAFVDI
GLEKNAFLFVEDAVPPRTTTDEEAKSNYHVNITDVLKEGQEILVQIAKEPIGTKGARVTT
HITLPGRYLVLMPTVDYIGISRRIENESERERLKALAEKVKPANMGLIVRTIAEGMDEEE
LVQDVTVLTKLWKKIQNRSCHGPVPNLIHKDLELVQRILRDIFTEDIDNLIIDSRYEYEK
VLELMELTTPQLKSRVSLYEQDNLFEKFGVDEEIEKILKPRVWLKCGGYIVIDQTEALTA
IDVNTGKYVGSTNLADTVLKTNLDAAVEIARQLRLRNIGGIIIVDFIDMPDQEHQRMVLQ
KLEEEVRKDKTKTNVLGLTQLGLVEMTRKKVRQGLENVLLKPCPYCDGRGKVLSEETISI
RAKNEIFKLAQHTSAEAILVEVHPSVASLLIGSGGTQLRELEAKTKKSILIRGCEHYHQE
VINIRALYSQSEIEAIGVPVRPGQILEVRIEEPHASNVYDGIGRVNGFIVDVEGASALIG
ETVPVEITKVYRTYCKARVVDLHK
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaaggagatactggttaatgtacgggaagaggaaaccagggtagccgttttggaa
gataaagtagttgtggaaatatatatagaaagatccttgaaccaacggcttgtaggcaat
atatataagggaaaggtggaaaatgtgctgcccggtatgcaggccgcttttgtagatatt
ggcctggaaaaaaatgccttcctgtttgtggaagatgcggtgccgcccaggacgacaaca
gacgaagaggctaaaagcaattaccatgtcaatataaccgatgttttgaaagagggccag
gaaattttggttcagattgctaaagaaccaattggtactaagggggctagggttactact
catattacattaccgggccgatacctggtattaatgcctaccgtagactacataggaatt
tcccggcggatagagaatgaaagtgagcgggagaggttaaaagccctggcggaaaaagta
aagccggcgaatatggggttgatagtccggaccattgccgagggtatggacgaagaagaa
ctggtacaggatgtcacggtattgaccaagttatggaaaaagattcagaaccggtcatgt
cacggtccggtccctaacctgatacataaggacctggaattggtccagcgcattttgcgc
gatattttcacagaagatattgataacctgattattgattcccgttatgaatatgaaaaa
gtactggaattaatggagcttacaacgccacagttaaagagcagagtatccctttacgaa
caggataatttatttgaaaagtttggcgttgacgaggaaattgaaaaaatccttaagccc
agggtgtggcttaagtgtggaggatatattgttattgaccagacagaagccctgacagct
atagatgtaaatacgggcaaatatgtggggtccaccaatctggcagatacggtattgaaa
accaaccttgatgccgccgtagagatagcccgccagcttcggttgagaaatatcggaggc
attatcatcgtagattttattgatatgcctgaccaggaacaccagcggatggtactacag
aaactggaagaggaagtacgcaaagataagacaaagaccaacgtacttggcttgacacaa
ttgggattagttgagatgaccaggaaaaaagtccggcaaggactggagaacgtcttgtta
aaaccatgcccttattgtgacggccggggtaaagttttatcagaagagacaataagtatt
cgggcgaagaatgaaatttttaagcttgcccagcataccagtgcggaagcgattttggtt
gaggtccacccatcagtagcttctctgctgataggcagcggtggtactcaactcagggag
ttggaagccaaaacgaagaaaagtatccttatccggggatgcgaacactaccaccaggaa
gttataaatatcagggctctctattcccagtcagaaattgaggctataggtgttcccgta
cgccctgggcagattttggaggtcagaattgaggaacctcatgcttccaacgtatacgac
ggtataggccgggttaacggtttcatcgtggatgtggaaggcgccagtgctttaatcggg
gaaacggttcctgtggaaataaccaaggtttaccggacatactgtaaagcgcgggttgta
gacttgcacaaatag
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