Thermincola potens: TherJR_2912
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Entry
TherJR_2912 CDS
T01226
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
tjr
Thermincola potens
Pathway
tjr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tjr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TherJR_2912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tjr03021
]
TherJR_2912
03019 Messenger RNA biogenesis [BR:
tjr03019
]
TherJR_2912
Transcription machinery [BR:
tjr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
TherJR_2912
Messenger RNA biogenesis [BR:
tjr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TherJR_2912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
NACHT
ATPase_2
AAA
AAA_22
S1CSD-TOTE-2
Fungal_virus_P2_C
Spore_III_AA
NB-ARC
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ADG83744
UniProt:
D5XDJ8
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All DBs
Position
complement(3046229..3047470)
Genome browser
AA seq
413 aa
AA seq
DB search
MNEAMLEAMTMVELYKIAKELEITGYYKLRKKELIFEIMKHKTKNDEVLTAQGVLEILPD
GYGFLRPFGYLPSQDDIYVSPSQIRRFDLMTGDLISGQVRPPKDNERYFALLRVETVNGF
DAEAAGDRVHFDALTPIYPTERITLETSPDLLSTRLIDLIAPLGKGQRGLIVSPPKAGKT
VLLKQIANSITKNYPDIHLMVLLIDERPEEVTDMQRSVRGEVVSSTFDEPAENHVKVSEM
VLERAKRLVEHKKDVVILLDSITRLARAYNLVEPPSGRTLSGGVDPSALHKPKRFFGAAR
NIEEGGSLTILATALVDTGSRMDDVIFEEFKGTGNMELILDRKLAERRIFPAIDIKRSGT
RKEDLLLSKEELELMWGFRKSFANATNGEAIEILAESLKKTKTNKELLVRAVS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagctatgctggaagctatgacaatggtcgaactttataaaatcgcaaaagaa
ctggaaatcaccggatattacaaacttaggaaaaaagagctcattttcgaaataatgaaa
cacaagacaaaaaacgatgaagttctaactgcgcaaggagttctggaaattttgccggac
ggctacggttttcttcgtccctttggttatttgcccagccaggatgatatctatgtatcc
ccatcacagatcaggcgatttgatttaatgacaggtgatttaatcagcggacaggtgcgg
ccgccgaaggataatgaaaggtattttgccctcctcagggtggaaacggtaaacggtttt
gatgcggaggcagcaggcgacagagtgcattttgatgctttaaccccaatttatcctacg
gaaagaattactctggaaaccagtcccgatttgttatctacccgccttatagaccttatt
gctcccctgggcaaggggcagcgggggctgatcgtatcaccgccgaaagccggtaaaacc
gttttgttaaagcaaattgccaatagcattactaaaaactatccggatattcatttaatg
gtactgcttattgacgagcggccggaagaagttacagatatgcagagatcggtgcggggt
gaagttgtcagctcaacttttgatgaacctgccgaaaaccatgtcaaagtatcggagatg
gtactggagcgggctaaacggttggtggaacataaaaaggatgtggtgattctgctcgac
agtattacccgtctggccagggcatataacctggtagagccgcccagcggtcgtacttta
tccggcggagtggatcccagcgctttacataagcccaaaaggttttttggcgctgcgcga
aatatagaggaaggcggcagcctgaccatactggccacggccctggttgataccggcagc
agaatggatgacgtgatttttgaggaatttaaaggtacgggcaatatggaattgattctg
gacaggaaattggccgagcggaggattttcccggctatagacataaaacgttccggcacc
cgtaaagaagacctgctgctgagcaaagaggaactggaattaatgtggggtttcagaaag
agctttgccaatgctacaaatggcgaagctatcgagatactggccgaaagcctgaagaaa
acgaaaaccaacaaggaactgcttgtacgcgcagtcagttag
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