Thermincola potens: TherJR_2992
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Entry
TherJR_2992 CDS
T01226
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
Organism
tjr
Thermincola potens
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Fe_hyd_lg_C
Sigma54_activ_2
HTH_8
FeS
Fer4_9
Fer4_7
Fer4
Fer4_10
Mg_chelatase
AAA_5
Fer4_21
Fer4_2
Fer4_6
AAA_2
Fer4_16
HTH_50
AAA_16
AAA_3
AAA
Fer4_18
AAA_7
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ADG83821
UniProt:
D5XDS5
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Position
complement(3132184..3134379)
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AA seq
731 aa
AA seq
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MSVVTTISEKCQRCYACVRNCPVKAIKVDRGQAKIIEERCIACGSCVRVCAQKAKKVASD
ISKAEYFLAVEKEVIAIVAPSFPAAFPEFPADNVLSGLYELGFHDVEEVSLGVQLTIPEY
KKLIEKAEFPVISSFCPAVVGLIEKHYPDLIKYLAPIDTAMIACGKYIKKHRKKARVVFI
GPCVAKKEEARLRGRGVIDAVLTFKELKKMFHEKGIDLKKIKSNPNILHNGKAKLFPLPG
GLLANLGYKLDLSNQEFFNIEGRENCFEIIKNLSTGAIMPRFVDILFCNGCIDGPEIDSD
VDLITRRNLVAAYARRFGEQAKISAAGLDLKTCFVDRHVDYPVPSEEEIKEILKLTYKIR
PEDELNCGSCGYDTCREQAIAAYQGLAEIDMCFPYLLHKSRGEIEYYRNRLNMQRREDLL
DAIIGESLAMKKVKQLVERAAATNSTVLVIGESGVGKEVIAQAIHNLSSRRDKPFIGINC
AALPELLLESELFGYEEGAFTGARKGGKPGKFDLAHGGTILLDEIGDMPLNMQAKLLRVL
QERQFERIGGTNTVEMDVRILAATNKPLKQLVQKGKFRIDLYYRLNVLNIYVPALRERKE
DIPLLIGHFMEKMSIEKRVSPKIVSDEAMEALVAYDWPGNVRELENVLERAMIIADGNII
KLEHLPAQVRVNSRPGEEVKIKPLKQAVQELEKSMIENALKLTNNNRVNAAELLGIPRAT
LYQKLKQFGLL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtagttacgacaataagtgagaagtgtcaaaggtgttacgcctgtgtccgcaac
tgcccagttaaggcgatcaaagttgacaggggacaggccaaaattatagaagaaaggtgc
attgcctgcgggtcttgcgtgcgggtctgtgcccaaaaagcaaagaaagttgcttccgat
atcagtaaagcagaatactttttggctgttgaaaaggaagttattgctattgttgcgcct
tcttttccggcagcctttccggaatttcccgcggataacgtattgagcgggctttatgaa
ttgggctttcacgatgttgaggaagtttccctgggggtccaactgaccataccggagtat
aaaaagctgattgaaaaagcggaatttccggtcataagttctttctgcccggccgttgtc
ggtttgatagaaaaacactatcctgatttgattaaatatttggcgcccatagatacggcc
atgattgcttgcggcaaatacattaaaaagcatcgaaaaaaagccagagtagtatttatt
gggccctgtgtggccaaaaaagaagaagcccggttaaggggccggggtgttattgatgcg
gttctgacttttaaagaactgaaaaaaatgtttcacgaaaaaggcatcgatcttaaaaag
attaaatcaaatcccaacattctgcacaacggcaaggccaagcttttccccttacctggg
gggttgcttgccaaccttggctataaactcgacctttctaaccaggagttctttaatata
gaaggaagggaaaattgttttgaaataattaaaaacttaagtaccggtgcaattatgccc
cgatttgtagatatcctgttttgtaacggatgtatagatggaccggaaatcgattcagat
gttgatctcattaccaggcgcaacctggtggccgcttatgcgcgaaggtttggtgagcag
gcaaaaatatccgccgccgggctggatttaaaaacctgctttgtggacaggcatgttgat
tatccagtaccaagtgaggaagaaattaaagaaattctaaaattaacgtataaaataagg
cctgaagacgagttgaactgtggatcctgcggttatgatacctgtcgggaacaggctata
gctgcttaccagggactggcggagattgacatgtgcttcccctacctgttgcataaatcg
cgcggagagattgagtattaccgaaaccgcctgaatatgcagcgccgcgaggatttactt
gatgcaattatcggtgagagcttagccatgaaaaaagtgaaacagttggttgaaagggcg
gcggctactaactctaccgtgttggtaatcggggaaagcggtgtggggaaagaggtaatt
gcacaggccattcataacttaagttcccgccgggacaagccatttatcggaataaactgc
gctgctttaccggaacttttactggaatcagaattgtttggctacgaagaaggggccttt
accggggccagaaagggtggcaaaccgggtaaatttgacctggctcatgggggaacgatt
ttacttgatgaaataggcgatatgccccttaatatgcaggccaaattgctgcgtgtgttg
caggagcgccagttcgagagaataggcggtacaaataccgtagaaatggatgtcaggatt
ttggctgccaccaataaaccgttgaaacagcttgtacaaaaaggtaagtttagaattgat
ctttattaccggcttaatgttttaaacatttatgttccggccctcagggaacgcaaagag
gatattccgcttttaatcgggcattttatggaaaagatgtcgatagaaaaacgggtttcc
cccaaaattgtttccgatgaggctatggaagcccttgtggcatacgattggccgggaaat
gtgcgggagctcgagaatgtattagaaagggctatgattattgcagacggcaatattata
aaattagaacatttaccggcgcaggtaagagtcaattccaggcccggtgaagaagttaaa
attaaacctctaaaacaggcagttcaggaacttgaaaaaagtatgatcgaaaatgcactg
aaacttaccaataacaatagggtaaatgcggctgagttgttgggcatacccagggctacc
ttataccagaaactaaaacagtttggcctgctttaa
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