Thermoanaerobacter kivui: TKV_c02180
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Entry
TKV_c02180 CDS
T03397
Symbol
sbcC
Name
(GenBank) exodeoxyribonuclease I subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tki
Thermoanaerobacter kivui
Brite
KEGG Orthology (KO) [BR:
tki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tki03400
]
TKV_c02180 (sbcC)
DNA repair and recombination proteins [BR:
tki03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TKV_c02180 (sbcC)
Archaeal homologous recombinant proteins
TKV_c02180 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
DUF3450
ABC_ATPase
ABC_tran
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-ProteinID:
AIS51423
UniProt:
A0A097ANN8
LinkDB
All DBs
Position
221018..224551
Genome browser
AA seq
1177 aa
AA seq
DB search
MRPLKLKIAGLNSFVEEQIIDFEVLTEKGLFGIFGPTGSGKSTIIDAITLSMYGKIPRNS
KDFINTQSTSMSLTYQFEIGVDGARKRYIVERNVKRDAKSGGYKTTLARLREIGESGERV
LAEKDREVQQKIVDLIGLTAEDFTRSVVLPQGKFSEFLKLTGKERRDMLERIFGLEKYGS
KLLVRIRDVKREKSNLLNEVNAKLSQHEGVTKEALEDLKKKFEILKEEEKTLKEQKDKLD
KEREKLKGIWEKQQELNQFLHKKEVLDRKLKEIEDKKEKLKKAEKALSVKPYIDSLVETE
KKLILNQKDVEKYSKELEEAEKLLEKVEKEYEASLKEKEEKIPLIIEKEERLKRAFKLRD
EIKKINSEREKLVKEYKDLKKQIDGIEREIKALSDSIDIAKKSLSEKEKRINEIKVDSNK
REKIFAAFEIQKEFERADKEKKEKEKRTLELKELIGKQQKDIEKIDNLLKQKEKEIQEVD
NNIKNLEMQKPPTNEDLLDLQKSLERKRLEILELKEKEKLKNETENNLKEILKIKEEINN
EIKEIEEKLKNKNNSLEEVKKDIEELVKNNMAGELAEGLKEGVPCPVCGSIHHVRLAQKV
EEDLIKEKQEIKANLEKDIMDYQSKLFKLKGELSGIEVKEEMYKKEYDKLWDILKDINLL
KLEEELNKMESDFIQWKEKLEKWNKSKEELETLIKKLKEEKASLDLEHTRLKEGINKDIS
LLKEFESSLEAISITYSELEGQLRISREELGISDFKEKVEEINQKEREIEGLRNEIENFK
NTIEELTNKKETLSNNLNALSIRKGQIEEIGKEKSKNLRERQQEFDSLSEGRDIEEYLKE
IQYNKEKITKMESVLKETLEKARKDKQNIESKKISALESRDLLNNMFREQSEKLENALLE
KGFKDKKEALEYLLDSENIKKIEKEIKNFENEYVSVNKSIDRLMEILKGQKINEEEWNQL
EESIKGLEQVLNEKRKEIGATEKAISDMQENLQKVEEFTKQKKELERVVDILNELDNLFQ
GNKFVDFIAARQLKYITFFASKRLKEISRGRYALEIDSDNNFVMRDDFNGGVRRSVDTLS
GGETFLTSLSLALALSSHIQLKGRAPLEFFFLDEGFGSLDAELLDIVMTSLERLKKDKMV
VGIISHVEELKDRVPVKLIVTPPAASLEGSKVRIEYT
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgagacctctgaagcttaaaattgcagggcttaatagttttgtagaagaacaaattatt
gattttgaagtcctaacagaaaaaggactttttggcatatttggtcccacaggaagtgga
aaatccactattatagatgcaattactctttcaatgtacggaaaaattcccagaaatagc
aaggattttataaatactcaatctacatctatgtctttgacataccagtttgaaataggt
gttgatggggcaagaaaaaggtatatagttgagagaaatgtaaaaagggacgcaaaaagc
ggcggttataaaactacattagcaagactgcgggaaataggggaaagtggagaaagagtt
ttggcagaaaaagatagggaagttcagcaaaaaatagtggatttaattggacttacagca
gaggattttactcgttctgtagtgcttccacaagggaaatttagtgaatttttaaagcta
acaggcaaagaaagaagggacatgttagagaggatttttggcttagaaaagtatggaagc
aaattacttgttagaataagagatgtaaagagagaaaaaagtaatttattgaatgaggta
aatgcgaagttaagtcagcacgaaggtgttactaaagaagcattggaagatttaaagaaa
aagtttgagattttaaaagaagaagagaaaactttaaaagaacaaaaggataaattagat
aaagaaagggaaaaacttaaagggatatgggaaaaacagcaggaattaaatcaatttttg
cataagaaggaagtcttagaccgtaagttaaaagaaatagaagataaaaaggaaaagtta
aaaaaagcggaaaaggcattatcagtaaaaccgtatatagactctttagtggagacagag
aaaaaactcattttaaatcaaaaggatgtggaaaagtattctaaagagttggaggaggct
gaaaaattacttgagaaggtagaaaaagaatatgaggcttcattaaaagaaaaggaagaa
aaaattcctctcataattgaaaaggaagaaaggcttaaaagggcttttaaactgagagat
gagataaaaaagattaatagtgaaagggagaaacttgtaaaggagtataaagatttaaaa
aagcagatagatgggatagaaagagaaataaaagccctgtccgattctatagatatagca
aaaaaaagcttaagtgagaaggaaaaaagaattaatgaaattaaagttgattcgaataaa
agggaaaaaatttttgctgcttttgagattcagaaagagtttgaaagggcagacaaagag
aaaaaagaaaaggagaaaagaactttagaattaaaagagctaataggtaagcagcagaaa
gatattgaaaaaatagacaatttattgaaacaaaaagaaaaagaaatacaagaggttgac
aataatataaaaaatcttgaaatgcaaaagcctcccacaaatgaagaccttttggacctg
caaaaaagtttagaaagaaaaagattagaaattttagaattaaaagaaaaagaaaagtta
aaaaatgagacggaaaataatttaaaagaaattttaaaaataaaagaagaaataaataat
gagataaaagagattgaagagaaattaaaaaataagaataatagtttggaagaagtaaaa
aaagatatagaggaacttgtaaaaaacaacatggcaggtgaactggcagagggattaaaa
gaaggtgttccctgtcctgtctgtggttcgattcatcatgtaagattggcacaaaaggta
gaggaagacttaataaaagaaaagcaggaaataaaggcaaacttagaaaaggatataatg
gactatcaaagtaagctttttaaattaaaaggtgaattatcaggaatagaagtcaaagaa
gagatgtataaaaaagaatatgataaactgtgggatatattaaaagacattaacctttta
aagttagaagaagaattaaataagatggagtctgattttatacagtggaaagaaaaatta
gaaaaatggaataagagtaaggaagaattagagaccttaattaaaaaattaaaggaggaa
aaagcaagtttagatttagaacatacaagattaaaagaaggtataaataaagatattagc
cttttgaaagagtttgagtcttctcttgaggctattagtataacttacagtgaattagaa
ggtcagttaagaatatcaagggaagaattggggatttcagattttaaagaaaaagtggag
gagataaatcaaaaagagagggaaatagaaggcctgaggaatgaaatagagaattttaaa
aatacgattgaagaattgacaaataaaaaggaaaccctttcaaacaatctcaatgctctt
tcaataaggaaaggacagatagaggaaataggtaaggaaaaaagtaaaaaccttcgggag
aggcagcaggagtttgattctttatcagaaggtagagacatagaagaatatttaaaagag
attcagtataataaagaaaaaattacaaaaatggagagtgttttaaaagaaactttagaa
aaggcaagaaaggataaacaaaatatagagagtaaaaagatatctgcccttgagagtcgg
gaccttttaaataatatgtttagggaacaaagtgaaaaattagaaaatgctctattagaa
aagggatttaaggataaaaaagaggctttggagtatttattagacagtgaaaatattaaa
aaaattgagaaagaaattaagaattttgaaaatgaatatgtatctgtaaacaaaagtata
gacagactgatggagatattaaaggggcagaaaattaatgaagaagaatggaatcaatta
gaagaaagcattaaagggttggaacaggtcttaaacgaaaaaaggaaggaaataggcgct
acagaaaaggctatttcagatatgcaagagaatttgcaaaaagtagaagaatttacgaag
cagaaaaaggaattagagcgtgtagtggatatattaaatgaattggacaatctttttcag
ggaaataaatttgtagattttattgccgcaagacagcttaaatatataaccttttttgca
tcaaaaaggcttaaggaaataagcaggggaaggtatgctcttgagattgattcagacaac
aattttgtaatgagagatgacttcaatggcggagtaagaaggtctgtagatactttatct
ggcggtgaaacttttttgacatccctttctttggctttggctctttcttctcatatacaa
ttaaagggaagagcacctttagaattctttttcttagatgaaggctttggaagtcttgac
gcggaacttttggatatagtgatgacctctttagaaaggcttaaaaaagacaaaatggta
gtgggcataataagccatgtagaagaattaaaggacagggtacccgtaaaactgattgtt
acaccgcctgccgcttctttagaagggagtaaggtgagaatagaatatacatag
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