Thermoanaerobacter kivui: TKV_c05880
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Entry
TKV_c05880 CDS
T03397
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tki
Thermoanaerobacter kivui
Pathway
tki03420
Nucleotide excision repair
tki03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TKV_c05880 (pcrA)
03430 Mismatch repair
TKV_c05880 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tki03400
]
TKV_c05880 (pcrA)
Enzymes [BR:
tki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TKV_c05880 (pcrA)
DNA repair and recombination proteins [BR:
tki03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TKV_c05880 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
TKV_c05880 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_11
Viral_helicase1
AAA_30
DUF3553
ResIII
REP_ORF2-G2P
DEAD
Tudor_1_RapA
crAss001_48
FWWh
GMT-wHTH
Motif
Other DBs
NCBI-ProteinID:
AIS51784
UniProt:
A0A097APN3
LinkDB
All DBs
Position
580141..582276
Genome browser
AA seq
711 aa
AA seq
DB search
MNNILGNLNDKQREAVMTTEGPLLILAGAGSGKTRVLTHRIAYLIKEKKVSPSNILAITF
TNKAAEEMKTRVEDLLGYIGDLWVSTFHSACVRILRRDIDKIGYDRNFVIFDTTDQKALI
QECLKELNLSEKQYPVKTVLNAISSAKDKMVTPEEYIYVFGNEYRSKKISEIYKLYQKKL
KKNNALDFDDIIIKTIELFKESPEVLDFYQRKFKYIMVDEYQDTNMPQYHFVNMLAQKYR
NLCVVGDDDQSIYGWRGADVGNILNFEKDYPEAKVIKLEQNYRSTKTILEAANYVIDNNI
RRKKKTLWTNNEEGERIILCELENEREEAEFVIQEIINLKERENRSFRDFAILYRTNAQS
RAFEEALMRVRIPYKVVGALRFYDRKEIKDIIAYLRILVNPYDDISFKRIINVPKRGIGA
ATIEALEATALEKDTSLFFAIDDAKVSQRAKNSLLEFKEFILELIDKKDTMTVSEVINYI
LEETGYIEELEKEESEQAEGRIENLNEFLNAAYEFEESSEDKSLEAFLSGITLVSDIDLA
GEIGESVVLMTLHSAKGLEFPVVFMVGMEEGVFPSFKSFTDEYELEEERRLCYVGITRSK
EKLYLTYARRRNLYGKSQYSSYSRFISEIPERFLVRYHELSKPREEYRPVSSYVERKTYE
KAQYNLGDKVEHKIWGIGTVVKVEGEEITVAFPNVGIKKLDLKFAPIKAIS
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacatattaggtaacctcaacgacaaacaaagagaagcagttatgactacagaa
ggacctcttttgatattagcgggagctggaagcggcaagactcgcgtcctaactcataga
attgcttatcttataaaagagaaaaaagtatccccttctaacatactggctatcactttt
acaaataaagcggcagaagaaatgaaaacaagagtagaagatttattaggttatataggt
gacctatgggtatctactttccattctgcctgtgtgagaattttaaggcgagatattgac
aaaataggctatgacagaaatttcgtcatatttgatactactgaccaaaaggctttaata
caggaatgtcttaaagagctaaatttaagtgaaaaacagtatcctgtgaaaactgtctta
aatgctatttcttctgcaaaggataaaatggtaactccagaagagtatatttatgttttt
ggaaatgagtatagaagtaagaaaataagtgaaatatacaaattatatcaaaaaaagtta
aagaaaaacaatgcccttgattttgatgacataattataaaaactattgaactttttaag
gaaagtcccgaagttttagacttttaccagagaaaatttaaatacataatggtagatgaa
tatcaagacacaaatatgcctcaataccattttgtgaatatgttagcccagaaatacaga
aacttatgtgtggttggcgatgatgaccaaagcatatatggctggagaggggcagatgta
ggtaacatattaaactttgagaaggattatcctgaggctaaagttataaaattagagcaa
aactatcgttctaccaaaacaatattggaagcagccaattatgtcatagataataatata
agaaggaagaaaaagactttatggacaaataatgaagaaggagaaaggataattctctgt
gaattagagaatgagagggaagaggcggaatttgtgatacaggaaataatcaacttaaaa
gaaagagaaaatagaagttttagggattttgctattttatacaggacaaatgcccagtcc
cgtgcttttgaggaagccttaatgagggtgcgaattccttacaaagtggtcggagcttta
aggttttacgacagaaaagaaataaaagacataattgcctatttgcgtatacttgtaaat
ccttatgatgacatatcttttaaaaggataataaacgttcctaaaagaggtattggagct
gcaaccattgaagcattagaggctacagctttggagaaagacaccagtcttttttttgca
atagatgatgcaaaagtaagccaaagggctaaaaatagccttttagaatttaaggagttt
attttagaattaattgataaaaaagatacaatgactgtcagtgaagtaataaattacatt
ttagaagagactggatatatagaggagttagaaaaagaagaatcagagcaagcagaggga
agaatagaaaacctaaatgagtttttaaatgcggcttatgaatttgaagagtcttcagag
gacaaatctttagaagcatttttgtccggcataacattggtttctgatattgacttggct
ggagagattggagaaagcgttgttctcatgactttacattctgcaaaaggattagagttt
ccagtagtctttatggtaggtatggaagaaggggtatttccttcttttaagtcatttaca
gatgaatatgaattagaagaggaaagacggctttgttatgttggtattacgaggtctaaa
gaaaaactttatttgacctatgcgaggaggagaaatttatacggcaaatctcagtacagc
tcctattcccgttttataagcgaaatacctgagaggtttttagtaagataccatgagtta
tcaaagccaagagaagagtataggcctgtatctagctatgtagaaaggaaaacttatgaa
aaggctcaatataatttaggagataaagtggagcataaaatatgggggataggtactgta
gtaaaagtagaaggagaagagattacagttgcctttccaaatgtgggcataaaaaagtta
gacttaaagtttgctcctattaaagctatttcttaa
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