Thermoanaerobacter kivui: TKV_c11660
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Entry
TKV_c11660 CDS
T03397
Symbol
rnjA
Name
(GenBank) ribonuclease J 1
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
tki
Thermoanaerobacter kivui
Pathway
tki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TKV_c11660 (rnjA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tki03019
]
TKV_c11660 (rnjA)
Messenger RNA biogenesis [BR:
tki03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TKV_c11660 (rnjA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
AIS52337
UniProt:
A0A097ARA2
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All DBs
Position
1125345..1127009
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AA seq
554 aa
AA seq
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MANKAKLKIIPLGGLNEIGKNMTVFEFGNDIIVVDCGLAFPDDEMLGIDLVIPDITYLLK
NREKVRAIVLTHGHEDHIGALPYVLKQLNVPVYGTRLTLGLVEYKLKEHGILKDSKLITE
RPREIVEIGQFKVEFIRTSHSIADSAALAIHTPVGTVFHSGDFKIDFTPIGGEIADLHRF
AQLGEKGVLVMLCDSTNIERPGYTMSERTVGETFDNLFRKAEQRIIVATFASNIHRVQQI
IDSAYKYGRRVAISGRSMLNVVNVAVELGYLLIPDGLLVDIDEANKLPHDRVVIITTGSQ
GEPMSALTRMASSEHKKVEIVPGDTVIISASAIPGNEKLISRVINQLFKKGANVIYEALA
DIHVSGHACQEEIKLLHTLIKPKFFIPVHGEYRHLVQHAKLAETLGMPPQNIFVVDNGTV
LEFTKNSGRVAGTVTAGKVLVDGLGVGDVGNIVLRDRKHLAQDGLLVVVVTISKETGSLI
AGPDIISRGFVYVRESEDLMEESKNIVREVLAKCEKEEINEWSAIKSMIKDNLSSFLYEK
TKRNPMILPIIMEI
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaacaaggcaaaactcaaaataataccattgggcggtttaaatgagatcggcaaa
aacatgactgtttttgagttcgggaatgacattatagtggttgattgcggtctcgctttt
cctgatgatgagatgttgggaatagacctcgtcattcctgacattacttatttgttgaaa
aatcgtgaaaaagtgagggctattgttctcactcatggtcatgaagaccacattggagct
ttaccttatgttctaaaacagcttaatgttccggtgtacggcactcgcttaacattaggt
ttggtagaatataagttgaaggagcacggcattttaaaagatagtaaattgataacggaa
agacccagggagattgtggaaattggccaatttaaagtagagttcataaggacttctcac
agcatagcagattcggctgctcttgcaatccacactcctgtcggaacagtgtttcactca
ggggattttaaaatagactttactcctataggaggagaaattgcagacttacaccgtttt
gcacagttaggggaaaaaggagtacttgtaatgctgtgtgacagcacgaacattgaacga
cccggttataccatgtcagaaaggacggttggagaaacttttgacaatctttttagaaaa
gcagaacagcgcattatagttgcgacctttgcttccaatattcacagagtacagcaaatt
atagactctgcctacaaatatggaagaagggttgctatttctggcagaagtatgttaaat
gtggtcaatgtagcagtagaattagggtatttgcttatccctgatgggcttttagtagat
attgatgaagctaataaactgccccatgacagagttgttatcataaccaccggaagccaa
ggagaacctatgtctgctcttacaagaatggcttcttctgagcataaaaaagtagagatt
gtaccgggagatacagtgataatttctgcttctgctattccgggaaatgaaaaacttatt
tctcgcgtcatcaaccaattatttaaaaaaggtgccaatgtaatttatgaagcattggca
gatattcatgtatcgggtcacgcttgtcaagaagagattaagctacttcatacattaata
aaacctaaatttttcattcctgttcatggagaatacagacatttagttcagcatgctaag
cttgcagagactttaggaatgcctccccaaaatatctttgtagtagataatgggacggta
ttagagtttacgaaaaattctggcagagttgcaggtacagtcacagcgggtaaagtatta
gtagatggtcttggggtaggagatgtaggaaatatcgtcttaagagacagaaaacatttg
gcacaagatggattattagtagtagtagttaccatatccaaagaaactggcagtctcatt
gcaggccccgacataatttcaaggggatttgtatatgtgagagaatctgaagatttaatg
gaggaatccaaaaatatcgttagagaagtgctggcaaagtgcgaaaaagaagagattaat
gaatggtctgctataaaatcaatgataaaagacaatttaagcagttttctgtatgaaaag
accaagcggaatcccatgatattgccaattataatggagatttaa
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