Thermoanaerobacter kivui: TKV_c18000
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Entry
TKV_c18000 CDS
T03397
Symbol
uvrB1
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
tki
Thermoanaerobacter kivui
Pathway
tki03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TKV_c18000 (uvrB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tki03400
]
TKV_c18000 (uvrB1)
DNA repair and recombination proteins [BR:
tki03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TKV_c18000 (uvrB1)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TKV_c18000 (uvrB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
T2SSE
DUF87
AAA_22
DUF406
SWI2_SNF2
AAA_16
Kinesin
P-loop_SecA
Microtub_bd
FlaG
Motif
Other DBs
NCBI-ProteinID:
AIS52951
UniProt:
A0A097AT03
LinkDB
All DBs
Position
complement(1723699..1725684)
Genome browser
AA seq
661 aa
AA seq
DB search
MDGFKLVSNFKPRGDQPQAIEKLVEGVKAGFRFQTLLGVTGSGKTFTMANIIQKLNKPTL
VIAHNKTLAAQLCSEFREFFPENAVEYFVSYYDYYQPEAYIPQTDTYIEKDASINEEIDK
LRHSATAALFERRDVIIVASVSCIYGLGDPIDYENLMLSLRPGMIKDRDEIVRKLVDIQY
ERNDVNFTRGKFRVRGDVIEIFPASSSNKAIRVELFGDEIERIAEIDVVTGEVLGFRNHV
AIFPASHYATSRDKLERAIKSIREELEQRYKELKDAGKIVEAERLRQRTNYDLEMLQEMG
YCQGIENYSRHISGRTPGSPPYTLLDYFSKDFLIFIDESHVTIPQIRGMYNGDRSRKEAL
VEYGFRLPSAFDNRPLTFEEFEQRINQVIFVSATPGPYELKHSEQVVEQIIRPTGLVDPE
VIVRPVKGQVDDLIGEIRKTVDAGFRVLVTTLTKKMAEDLTDYLKDMGIKVKYLHSDIET
IERMEIIRDLRLGKFDVLIGINLLREGLDIPEVALVAILDADKEGFLRSETSLIQTIGRA
ARNAQGRVIMYADAITNSMKRAIDETNRRRRIQMEYNKKHGITPKTIIKGVRDIIEATHV
AEEKYEYKAKKAKTYNPETIKSTIEQLEKEMKEAAIELQFEKAAKLRDMIFELKKQLEEV
V
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggatggatttaagctggtttctaattttaagccgagaggtgaccaacctcaagccata
gaaaaattagttgagggagtaaaggcaggatttaggtttcaaactttattaggagttacc
ggttcaggcaagacttttactatggcgaatataatacaaaaattaaacaaacctaccctt
gtaattgctcacaacaaaacactggcagctcagctttgcagcgaatttagggaatttttt
ccagagaatgctgtagagtattttgtcagctattatgactattatcaaccagaggcttat
ataccgcagacagatacttatattgagaaagacgcttctataaatgaagagatagataag
ttaaggcattctgctacagcagctctttttgaacgcagagatgtcataattgttgccagt
gtttcttgcatatatggtttaggagaccctattgattatgaaaatctcatgctttctcta
aggccaggaatgataaaagacagagatgaaatagtcagaaaacttgtagatatacagtat
gaaagaaatgatgtgaattttacaaggggcaaattcagggtaagaggagatgtaatagaa
atttttcctgcttcttcttccaataaagctataagagtagagctttttggtgatgaaatc
gaaagaatagcggaaattgatgtggtgacaggagaagtattaggttttagaaatcacgtg
gctatatttcctgcttcccactatgccacttccagagacaaactggaaagagcaataaaa
agcatccgagaagaactggagcaaaggtataaagaacttaaagatgctggcaaaattgta
gaggctgaaagattaaggcagaggacgaactatgacctggaaatgcttcaagaaatgggt
tactgccaaggcatagaaaattattcgagacatatttcaggaaggactccaggaagtccc
ccttatacgcttttggattatttttccaaagactttctcatctttatagatgagtcccat
gtgacaattcctcaaattcgaggtatgtacaatggagacaggtccagaaaagaagcgtta
gtagaatatggctttaggcttccttctgcttttgacaatcgccctcttacctttgaagaa
tttgaacaaaggataaatcaggttatatttgtttctgcaacgccaggaccttacgagctt
aaacattcagagcaagttgttgagcagataataaggccgacaggacttgtagatccagaa
gtaatagtaagaccggttaaaggccaagttgatgacttaataggagaaattagaaaaact
gttgatgcaggtttcagagtacttgtgacgactcttacaaagaaaatggcagaggattta
acagattatctaaaggatatgggaataaaagtaaaatacttgcattcagatattgaaact
atagaaagaatggagataataagggatttgagattgggtaaattcgatgttttaataggc
ataaaccttttaagagaaggtttagatataccagaggtggctttagtggcaatattagat
gctgacaaagaaggatttttgcgctcagaaacgtcattaatacagactataggccgtgct
gcaagaaatgctcaaggaagagttataatgtatgccgacgctataactaattctatgaaa
agggcaattgatgaaacaaacagaagaagaagaatacagatggaatataacaaaaagcat
ggaataacgccaaagacaataataaaaggtgtgagagacattattgaagctacccatgtt
gcagaagaaaaatatgaatacaaagcaaagaaagcaaaaacgtataaccctgagactatt
aagtcaacgatagagcaacttgaaaaggaaatgaaagaagctgctatcgaattgcagttt
gaaaaagctgcaaaattgagagatatgatttttgagttgaagaaacaattggaggaagta
gtttga
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