Thermoanaerobacter kivui: TKV_c20640
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Entry
TKV_c20640 CDS
T03397
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tki
Thermoanaerobacter kivui
Pathway
tki03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tki00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TKV_c20640 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tki03021
]
TKV_c20640 (rpoC)
03400 DNA repair and recombination proteins [BR:
tki03400
]
TKV_c20640 (rpoC)
Enzymes [BR:
tki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TKV_c20640 (rpoC)
Transcription machinery [BR:
tki03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TKV_c20640 (rpoC)
DNA repair and recombination proteins [BR:
tki03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TKV_c20640 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
DUF5605
Motif
Other DBs
NCBI-ProteinID:
AIS53198
UniProt:
A0A097ATQ7
LinkDB
All DBs
Position
complement(1969422..1972976)
Genome browser
AA seq
1184 aa
AA seq
DB search
MFELKNFEAIKIGLASPEKIREWSRGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLLLDM
SPRALEKVLYFASYVVIDPGDTPLTKKQLLSEKEYREYLDKYGNRFRAGMGAEAIKELLQ
EIDLEKLSKELKAEIRESTGQKRVRAIRRLEVVQAFIDSGNRPEWMILEVIPVIPPDLRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVRNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKVYQCGLPKE
MALELFKPFVMKKLVDEGLAQHIKSAKRMVEKVKPEVWDVLEEVIKEHPVLLNRAPTLHR
LGIQAFEPVLVEGRAIKLHPLVCTAYNADFDGDQMAVHIPLSVEAQAEARFLMLAANNIL
KPQDGKPVMTPTQDMVLGCYYLTADEDGVLGEGKYFSSPEEAIMAYQLGYIHIHAKIKVK
MTREIDGVKRSKIIETTVGKIIFNEAIPQNLGYVDRTNPETAFDLEVNDLVDKSKLGKIL
DRVYRLHGPTKTAETLDKIKELGFRYSTKAAITVSVSDMVIPKEKEQLLKEADEMVSKIE
SQFRRGLISEEERYESVIRTWNMTTEKVTEALMASLDKFNPIFMMAHSGARGSKNQIRQL
AGMRGLMADPSGRIIELPIRSNFREGLNVLEFFISTHGARKGLADTALRTADSGYLTRRL
VDVSQDVIVREDDCGTDEGIYVEEIREGNEVIEKLVDRIIGRVAAEDIVDSEGNIIVRRN
EMINEEEAERIEKAGITRVKIRSLLTCRSRHGVCRMCYGRNLATGEPVDIGEAVGIIAAQ
AIGEPGTQLTMRTFHTGGVAGADITQGLPRVEELFEARKPKGLAVISEISGVVKINESKK
RREVIVTDEENNISKTYLIPYGSRLKVHDGQVIQAGDELTEGSVNPHDLLKIKGIFAVQT
YLLQEVQKVYRLQGVEINDKHIEVIIRQMMRKVKVEDPGDTSMLPGELIDMFKFEDENKK
AIEKGLRPATGRRALLGITKAALATDSFLSAASFQETTRVLTDAAIKGKVDPLLGLKENV
IIGKLIPAGTGLSRYRNISVVKKVNDQQERQDKEKEETEVKASN
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgagttgaaaaactttgaagctattaagatcggtttggcatcacctgaaaaaata
agagaatggtcaaggggggaagtaaaaaagcctgaaactataaactacaggacgttaaaa
ccagaaaaagatgggcttttctgtgagcgaatttttggacctacaaaagactgggaatgc
cactgtggtaagtataaaagagttagatacaaaggtgttgtctgtgataggtgcggtgtt
gaggttacacgttctaaagttagaagagaaagaatggggcatattgaacttgctgcccca
gtttcccatatatggtattttaaaggtatacccagccgcatgggactccttctcgacatg
tctccaagagctttagaaaaagttttatactttgcttcctatgtagtaattgacccaggt
gacactcctcttaccaaaaagcagttattgtcagagaaagagtacagagaatatttggac
aaatatggtaataggtttagagcaggaatgggagcagaagctataaaagagttgttgcaa
gagattgaccttgaaaaattgagcaaagaactgaaagcggagataagagaatctacaggc
caaaaaagggtaagggctataagaagattagaagtagtgcaggcttttatagattcgggt
aacagaccggagtggatgattttagaggttattcctgttataccacctgatttaaggcct
atggtgcagttggatggcggacgctttgctacttcagacctcaatgacttatatagaaga
gttataaacagaaacaatagattaaaaaggcttttagacctcggtgctcctgacatcata
gttagaaatgagaagagaatgcttcaagaagcagtagacgctttaatagataatggaaga
agaggaagacctgtcacagggccaggcaacagacctttaaagtctctttcagacatgcta
aaaggtaaacagggaagattccgtcaaaatcttttgggtaaaagggtagactattcaggt
cgttctgttatagttgtaggacctgaactcaaagtttatcagtgtggtttgccaaaagaa
atggcattagagctttttaagccttttgtgatgaaaaaattagttgatgaaggtttggca
cagcacataaaaagcgctaagagaatggttgaaaaagtaaagcctgaagtgtgggatgta
ttggaggaagttataaaagaacatcctgttcttttaaatagagctccgacacttcacaga
ctcggtatccaagcttttgaaccagtgctggtagaaggaagagctataaagcttcatcct
cttgtgtgtacggcttataacgcagactttgacggtgaccagatggctgttcacataccg
ctgtcagtggaagctcaagccgaagcaaggtttttaatgttggcagcaaacaacatatta
aagccgcaagatggaaaacctgtcatgacacctacgcaagacatggttttgggatgttat
tatttaactgcagatgaggatggggtattgggtgaaggtaaatatttctccagcccagaa
gaagctattatggcataccaattaggatatattcacatccacgcaaaaataaaagtaaaa
atgacaagagaaattgacggggtgaaaaggtcgaagataattgagacgacggtcggtaaa
atcatttttaacgaggctatacctcaaaatttgggctatgtcgacaggacaaacccagaa
accgcttttgaccttgaagtcaatgatttagtcgataaatctaaattgggaaaaattctt
gatagagtctatagattacacggacctacaaagacagcagaaactcttgataaaattaaa
gaattaggatttagatattctacaaaagcagctattacagtaagcgtatctgacatggta
atacctaaagaaaaggaacagctgctaaaagaagcagatgaaatggtaagtaaaattgaa
agccaattcagacgcggtctcatatctgaagaagagagatatgaaagcgtcataaggaca
tggaatatgactacagaaaaagtaacagaggctcttatggcaagccttgataagttcaac
ccgatatttatgatggctcactctggagcaagaggaagcaaaaatcagataaggcaactg
gcaggaatgagaggcctcatggcagacccttcaggaagaattatagagctgcctataagg
tctaactttagagaaggtctcaatgttttggaattcttcatatctactcacggtgcaaga
aaaggtcttgcagatacagctttaagaactgccgactctggttatttgaccagaaggctt
gtagatgttagccaagacgtgatagttagagaggatgattgtggcactgatgaaggcatt
tatgtagaagaaataagagaaggaaacgaagtcattgaaaaattggtagacagaataatt
ggaagagttgcagcagaggatatagtagacagcgaaggcaatataattgttagaaggaat
gagatgataaatgaagaagaggctgaaagaattgaaaaagcaggtattacaagagttaaa
ataaggtcacttttgacatgtaggtctagacacggcgtatgcagaatgtgctatggaaga
aaccttgcaactggtgaaccagttgatataggtgaagcggtaggtattatcgcagcccag
gcaataggagaacctggtacacagcttaccatgagaactttccacactggtggtgtagct
ggtgcagatatcactcaaggtcttccaagagtggaggaactttttgaggcgagaaaacca
aaaggacttgctgtaatatctgaaatttctggtgttgttaaaatcaatgaatccaaaaaa
aggcgtgaggtcatcgttacagacgaagaaaataatatttccaaaacataccttattccg
tatggttccaggcttaaagttcatgacggtcaagtgatacaggcaggagatgaactgaca
gaagggtctgtaaatcctcatgaccttttgaaaataaagggtatatttgctgtacaaact
tatttgctacaagaggtccaaaaagtttacagattacaaggtgttgaaataaatgataag
catattgaagtaataataagacaaatgatgagaaaagtaaaagtagaagacccaggagat
acttcaatgcttcctggagagcttatagatatgtttaaattcgaagatgaaaacaaaaaa
gcaattgaaaaaggattaagacccgctactggaagaagagctcttttgggaattacaaag
gcggctttggcaacagattctttcttatcagctgcttctttccaagagacgacaagagtg
cttacagatgcggctataaaaggtaaagtagacccgctcttaggattaaaagaaaatgtg
ataataggtaaactaattcctgctggaacaggtttgtcacgctatagaaatatttctgtt
gtaaaaaaagtgaatgaccaacaggaaagacaagataaagaaaaagaagaaacagaagta
aaggcaagcaactaa
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integrated database retrieval system
