Thioalkalivibrio sp. K90mix: TK90_0007
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Entry
TK90_0007 CDS
T01174
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
tkm
Thioalkalivibrio sp. K90mix
Pathway
tkm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tkm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TK90_0007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tkm03400
]
TK90_0007
Enzymes [BR:
tkm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
TK90_0007
DNA repair and recombination proteins [BR:
tkm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
TK90_0007
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ADC70524
LinkDB
All DBs
Position
9115..9882
Genome browser
AA seq
255 aa
AA seq
DB search
MKIASWNVNSLKVRLPQVLDWLGSSRTDILALQETKLTDENFPVSAIHEAGYEVVYSGQK
TYNGVAILSRTQATDVVTDPPGLEDAQRRILAATIGDIRVVNLYVVNGENVGTEKYAYKL
DWLARMRSWLAAEIEAHPKLVVLGDFNIAPEDRDVHDPEAWHERILCSTPEREALAALTE
LGLADTFRAFEQPEEEFSWFDYRAASFRRNRGLRIDLVLASPALLKRLTAAGIDREPRGW
ERPSDHAPVWAEFSD
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatcgccagctggaacgtcaactctctaaaggtccgcctgccgcaggtcctcgac
tggctgggcagctcgcgtacggacatcctcgccctgcaggagaccaagctgaccgacgag
aacttcccggtcagtgccatccatgaagccggttacgaggtggtctactccggtcagaag
acctacaacggcgtggccatcctctcgcgtacgcaggcaacggacgtcgtgaccgacccg
ccggggctggaggatgcccagcgccgcatcctcgcggctacgatcggcgacatccgtgtc
gtcaatctctatgtggtgaacggcgagaacgtcggcaccgagaagtacgcctacaagctc
gactggctggcgcgcatgcgcagctggctggccgccgaaatcgaggcccacccgaaactc
gtcgtgctgggcgacttcaacatcgccccggaggaccgcgacgtgcatgaccccgaggcc
tggcacgagcgcatcctctgctcgaccccggaacgcgaggccctggcggcgctcacggag
ctgggccttgcggacaccttccgtgcgtttgaacagccggaggaggaattctcctggttt
gactaccgggcggcatcgttccggcgcaaccgcggccttcggatcgacctggttctcgcc
agccccgccctgctaaaacgcctgaccgccgcgggcatcgaccgcgaaccccggggctgg
gaacggccctccgaccacgcccccgtctgggccgaattcagcgactag
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