Thioalkalivibrio sp. K90mix: TK90_0023
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Entry
TK90_0023 CDS
T01174
Name
(GenBank) choline/carnitine/betaine transporter
KO
K03451
betaine/carnitine transporter, BCCT family
Organism
tkm
Thioalkalivibrio sp. K90mix
Brite
KEGG Orthology (KO) [BR:
tkm00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
TK90_0023
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Gene cluster
GFIT
Motif
Pfam:
BCCT
Sigma_reg_N
Motif
Other DBs
NCBI-ProteinID:
ADC70540
UniProt:
D3SBP2
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Position
complement(27493..29112)
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AA seq
539 aa
AA seq
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MSDNAQDPKREIEELEARYETDHEIGEQNINPLGLDLHNPVFAVSALLILAFVILSLMFP
EQADEGLGATRAWIGETFDWLFLSAGNLFVLFCLALILLPVGSIRIGGQDAKPDFSVLSW
FSMLFAAGMGIGLMFWAVAEPVGYFTEWFGTPLGIEGGTEEAKHAALGATMYHWGLHPWA
IYAVVGLALAFFAFNKGLPLTIRSAFYPIFGERIWGPLGHVIDTLAVLATLFGLATSLGL
GAQQAASGLESVFGIEAGLNTQVAIIIGVTVIALLSIMRGIHGGVRVLSNINLTLAVVLL
LFVALFGGFIAFLSNTGITLSAYAQYMWPLSNPVGRDDQTFYHEWTIFFWAWWISWSPFV
GMFIARVSRGRTVRQFVTAVLLVPTAVTVIWMSAFGGTGLDQARDGVGALADGISDSSLA
LFQMLEHLPLTTITSLLAITLVLVFFITSSDSGSLVIDSITSGGKTDAPQSQRLFWATVE
GVIAGVLLAVGGAAALQALQAGAVSAGLPFVIVLLFMCVSLMMGLFHELKLIRLKEATG
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacaacgcacaagacccgaaacgggagatcgaggagctcgaggcccgttacgag
accgatcacgagatcggggaacagaacatcaacccgctgggactggatctgcacaacccg
gtattcgccgtcagcgccctgctgatcctcgcgttcgtgatcctgtccctgatgttcccg
gaacaggccgacgagggcctgggcgccacgcgtgcctggatcggcgagacctttgactgg
ctgttcttgtcggccggcaacctgttcgtgctgttctgtctggccctgatcctgctgccg
gtcgggagcatccggattggcggccaggatgcgaagccggacttcagcgtgctgtcctgg
ttctcgatgctgttcgccgccggcatgggcatcggcctgatgttctgggccgtggccgaa
ccggtaggctacttcaccgagtggttcgggacgcccttgggcatcgagggcggcaccgag
gaagcgaagcacgcggccctgggtgcgacgatgtatcactggggcctgcacccatgggcg
atctatgccgtggtaggcctggcgctggcgttctttgcctttaacaagggcctgccgctg
accattcgctccgcgttctacccgatcttcggcgagcggatctggggcccgctcgggcat
gtgatcgacaccctggcggtactggccaccctgttcggcctggccacctccctgggtctt
ggggcgcagcaggcggcatcggggctggagtcggtgttcggcatcgaagccggcctgaac
acccaggtcgcgatcatcatcggcgtcacggtaattgccctgttgtcgatcatgcgcggc
atccatggcggggtgcgcgtgctcagcaacatcaacctgacgctggcggtggtactgcta
ctgttcgtggccctgttcggcggctttatcgccttcctctccaataccggcatcacgctg
agcgcctacgcccagtacatgtggccgctcagcaaccctgtgggtcgtgacgaccagacc
ttctatcacgagtggacgatcttcttctgggcctggtggatctcctggtcgccgtttgtc
ggcatgttcatcgcacgggtctcgcgcgggcgcacggtacgccagttcgtgaccgcggtg
ctgctggtgccaacggccgtgaccgtgatctggatgagtgcctttggcgggaccggcctg
gatcaggcccgcgacggggtcggtgcactggccgacggcatcagtgactcctcgctggcg
ctgttccagatgctcgagcacctgccgctgaccacgatcacctcactgctggcaatcacc
ctggtcctggttttcttcatcacctcgtcagactccggctcgctggtgatcgactcgatc
acctccggcggcaagaccgacgccccgcagtcccagcgcctgttctgggccacggtcgag
ggcgtgatcgccggtgtgctgctggcggtgggtggcgcggccgcgctgcaggccctgcag
gccggtgccgtcagcgccggcctgcccttcgtgatcgtgctgctgttcatgtgcgtcagc
ctgatgatggggctgttccacgaactcaagctgatccgactgaaggaggcgaccggatag
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