Thioalkalivibrio sp. K90mix: TK90_0121
Help
Entry
TK90_0121 CDS
T01174
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
tkm
Thioalkalivibrio sp. K90mix
Pathway
tkm00300
Lysine biosynthesis
tkm00470
D-Amino acid metabolism
tkm01100
Metabolic pathways
tkm01110
Biosynthesis of secondary metabolites
tkm01120
Microbial metabolism in diverse environments
tkm01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
tkm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
TK90_0121
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TK90_0121
Enzymes [BR:
tkm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
TK90_0121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ADC70637
UniProt:
D3SCB8
LinkDB
All DBs
Position
complement(127698..129002)
Genome browser
AA seq
434 aa
AA seq
DB search
MDYFDYHGNTLHAEGVALDHLAQLVGTPAYVYSRATLERHYRAFSEALIGTPHQVCFAVK
ANSALGVLNVLARLGAGFDIVSGGELERVLRAGGDPAKVVFSGVGKTAAEMRRALKVGIH
CFNVESAPELERLESIAAEMGVTAPVSIRVNPDVDAETHPYIATGLRENKFGVAIEEAPA
LYARVRDSQHLEATGVDFHIGSQLTRIDPFTDALKRVLTLVDQLAADGIELEHIDVGGGL
GVRYRDETPPEPDAWASALRKVMGERSLKVLLEPGRAIAANAGVFLTRVEYLKHTEAHDF
AIVDGAMNDLLRPALYGAWQEIIPVVQRRETAARTYDIVGPVCETGDFLGRERELALAAG
DVLAVRSAGAYGYVMAGNYNSRPRPPEIMVDGDHFQIINRREQVDHLMMRESMLPRDPED
ADPDDENPPGSVDP
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggactacttcgactaccacggcaacacgctgcatgccgaaggcgtggcgctggaccac
ctcgcccagctggtgggtacgcccgcctacgtgtattcgcgcgccacccttgagcgccac
taccgcgcgttcagcgaggccctgatcggcacgccgcaccaggtctgcttcgcggtgaag
gcgaactccgcgctgggggtgctgaacgtgctcgcgcgcctgggcgccggcttcgacatc
gtctccggcggcgaactggaacgtgtactgcgcgccggcggcgacccggcgaaggtcgtg
ttctcgggcgtcggcaagaccgcggccgagatgcgccgggcactgaaggtcggcatccat
tgcttcaacgtcgaatccgccccggagctggagcggctggagtccattgcggccgagatg
ggcgtgaccgcgccggtctcgatccgcgtgaacccggacgtcgacgccgagacccatccc
tatatcgccaccggcctgcgtgagaacaagttcggcgttgccatcgaggaggcgccggcg
ctgtatgcccgggtacgcgacagccagcacctggaggccaccggcgtcgatttccacatc
ggctcgcagctgacccggatcgacccgttcaccgatgccctgaaacgcgtgctgacgctg
gtcgaccagctggccgcagacggcatcgaactcgaacatatcgatgtcggcggcgggctg
ggcgtgcgctaccgcgacgagaccccgccggagccggacgcctgggccagtgccctgcgc
aaggtgatgggcgagcgctcgctgaaggtgctgctggaacccggccgggcaatcgcggcc
aacgccggggtgttcctgacccgcgtggagtacctcaagcacaccgaggcccacgacttc
gcgatcgtcgacggggcgatgaacgacctgctgcgcccggccctttatggcgcctggcag
gagatcatcccggtcgtgcagcgccgtgaaaccgccgcgcgcacctacgacatcgtcggc
ccggtctgcgagaccggcgatttcctcggccgcgaacgcgaactggcactggccgcgggc
gacgtgctcgccgtgcgctcggccggggcctacggctatgtcatggccggcaactacaat
tcgcgcccgcgcccgccggagatcatggtcgacggcgaccacttccagatcatcaaccgc
cgcgagcaggtcgaccacctgatgatgcgcgagagcatgctgccccgggaccccgaagac
gcggacccggacgacgaaaacccgcccgggagcgtggacccgtga
DBGET
integrated database retrieval system