Thioalkalivibrio sp. K90mix: TK90_0140
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Entry
TK90_0140 CDS
T01174
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
tkm
Thioalkalivibrio sp. K90mix
Pathway
tkm00730
Thiamine metabolism
tkm01100
Metabolic pathways
tkm01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
tkm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
TK90_0140
Enzymes [BR:
tkm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
TK90_0140
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ADC70656
LinkDB
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Position
complement(142782..144671)
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AA seq
629 aa
AA seq
DB search
MSAIPESFARKTAEVSAEVTRPFPNSEKRYVEGSRADIRVPYREVAQTPTMTSGTPEENP
PIPVYDTSGPYTDPDASIDLHRGLADLRGPWIDERADTEWLDGPSSEYGRARAADPELAS
LRFGHIRPPRRAQAGANVSQMHYARKGIITPEMEYVAIRENNRLQELRADPRYQKLLRQH
AGESFGASIPDEITPEFVRDEIARGRAIIPANINHPELEPMIIGRNFRVKVNTNIGNSAV
TSSIEEEVEKLVWSARWGGDTLMDLSTGKNIHETREWILRNSPVPIGTVPIYQALEKVDG
KPEDLTWELFRDTLIEQAEQGVDYFTIHAGVRLQYVPLTADRVTGIVSRGGSIMAKWCLA
HHQENFLYTHFDEICEIMKAFDVSFSLGDGLRPGCLADANDAAQFGELETLGELTQKAWA
HDVQVMIEGPGHVPLQKVKENVDKELEDCFEAPFYTLGPLVTDIAPAYDHITSGIGAANI
GWYGTAMLCYVTPKEHLGLPNKQDVRDGIITYKIAAHAADLAKGFPGAQLQDNALSKARF
EFRWEDQFNLALDPERAREFHDETLPKEAHKVAHFCSMCGPNFCSMKITQDVRDYAAAQG
ISADEALQKGMQEKAVEFVEKGAEIYRKT
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccatccccgagtcgtttgcccgcaagaccgccgaggtctccgcggaggtcacc
cgcccgttcccgaactccgagaagcgttacgtcgagggttcgcgcgcggacatccgcgtg
ccgtatcgcgaggtcgcgcagacgccgacgatgacctccggcacccccgaagagaacccg
ccgatcccggtctacgacacctccggcccctacaccgaccccgacgcaagcatcgacctg
caccgggggctggcggacctgcgcggcccctggatcgacgaacgcgcggacaccgagtgg
ctggacggcccgagctccgagtacggccgcgcccgcgccgccgatccggaactggccagc
ctgcgcttcgggcacatccgcccgccgcgccgcgcgcaggccggcgcgaacgtctcgcag
atgcactacgcccggaagggcatcatcaccccggagatggagtacgtcgcgatccgcgag
aacaaccgcctgcaggagctgcgcgccgacccgcgctaccagaagctgctgcgccagcac
gccggcgagtcgttcggcgcctccatcccggatgaaatcacccccgagttcgtgcgtgac
gagattgcccgcggtcgcgcgatcatccccgccaacatcaaccaccccgagctcgagccg
atgatcatcggccgcaacttccgggtgaaggtgaacaccaacatcggcaactccgcggtc
acctcctcgatcgaggaggaggtagaaaagcttgtctggtccgcgcgctggggcggcgac
accctgatggacctgtccaccggcaagaacatccacgagacccgcgagtggatcctgcgc
aactcgccggtaccgatcggcaccgtgccgatctaccaggcgctggagaaggtcgacggc
aagcccgaggacctgacctgggagctgttccgcgacaccctgatcgagcaggccgagcag
ggcgtggattacttcaccatccacgccggcgtgcggttgcagtacgtgccgctgactgct
gaccgcgtgaccggcatcgtctcccgcggcggttcgatcatggccaagtggtgcctggcg
catcaccaggagaacttcctctacacccactttgacgagatctgcgagatcatgaaggcc
ttcgacgtctcgttctcgctgggggacggcctgcgccccggctgcctggccgatgccaac
gacgccgcccagttcggcgagctggagaccctgggcgagctgacgcagaaggcctgggcg
cacgacgtgcaggtgatgatcgagggccccggccacgtcccgctgcagaaggtgaaggag
aacgtcgacaaggagctggaggactgcttcgaggcgccgttctacacccttggcccgctg
gtgaccgacatcgccccggcctacgaccacatcacctccggtatcggcgcggccaacatc
ggctggtacggcaccgcgatgctctgctacgtgacgccgaaagaacatctgggcctgccc
aacaagcaggacgtgcgcgacggcatcatcacctacaagatcgccgcccacgccgccgac
ctggccaagggcttccccggcgcgcagctgcaggacaacgccctgtccaaggcacgcttc
gagttccgctgggaggaccagttcaacctggcactggacccggagcgcgcgcgcgaattc
cacgacgagaccctgccgaaggaggcgcacaaggtcgcccacttctgctccatgtgcggc
ccgaacttctgctccatgaagatcacccaggacgtgcgcgactatgccgcggcccagggc
atcagcgctgacgaggccctgcagaagggcatgcaggagaaggcggtggaattcgtcgag
aagggcgcggagatctaccgcaagacctga
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