Thioalkalivibrio sp. K90mix: TK90_0167
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Entry
TK90_0167 CDS
T01174
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
tkm
Thioalkalivibrio sp. K90mix
Brite
KEGG Orthology (KO) [BR:
tkm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tkm03021
]
TK90_0167
Transcription machinery [BR:
tkm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TK90_0167
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
KORA
HTH_Tnp_ISL3
Sigma70_r1_2
UCR_14kD
HTH_3
TPR_4
GntR
LysM3_NFP
Motif
Other DBs
NCBI-ProteinID:
ADC70683
UniProt:
D3SCG4
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Position
complement(171951..172820)
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AA seq
289 aa
AA seq
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MSSKALATVHADLPVPVGNLDHYMQAVSRIEVLDPEHERELARSLHERNDLDAARQLILH
NLRFVVHVARGYQGYGLPLGDLIQEGNVGLMKAVRRFDPNQGVRLVSFAVHWIRAEIHEF
ILRNWRIVKVATTKAQRKLFFNLRSAKQRLGWMSNDEVSAVARDLGVSENDVWEMERRLS
SQDASFDPAPDSDDEHTYLAPAQRLSIEDMSDDPAQVAEDEDWDRHYQERLASTLGELDE
RSRDILARRYMSEPKATLHELAAEYGVSAERIRQIENNAIKRIRTAFAD
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaaggccctggcaaccgtgcatgcagacctgcccgttcccgtcgggaacctg
gaccattacatgcaggcggttagccggatcgaggtactggatccggagcacgagcgcgaa
ctcgcccggtcgctgcacgaacgcaacgacctggacgcggcgcgccaactgatcctgcac
aacctgcgcttcgtcgtgcatgtggcccgcggctaccagggctacggcctgcccctgggc
gacctgatccaggagggcaatgtgggcctgatgaaggccgtgcggcgcttcgacccgaac
cagggggtgcgcctggtctcgttcgcggtgcactggatccgcgccgagatccacgagttc
atcctgcgcaactggcgcatcgtgaaggtggcaacgaccaaggcgcagcgcaagctgttc
ttcaacctgcgcagcgccaagcagcgtctgggctggatgtcgaacgacgaggtctccgcc
gtcgccagggacctcggggtctccgagaatgacgtctgggagatggagcggcgactgtcc
agtcaggatgcgagctttgaccccgcgcccgacagcgacgacgagcacacctacctggcc
ccggcccagcgcctgagcatcgaggacatgagcgacgacccggcgcaggtggccgaggac
gaggactgggatcgccattatcaggagcggctggccagcaccctgggcgagctggacgaa
cgctcccgcgacatcctggcgcggcgctacatgagcgagcccaaggccacgctgcacgaa
ctggcggcggaatacggcgtctccgccgagcgcatccggcagatcgagaacaacgcgatc
aagcgcatccgcaccgccttcgccgactga
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