KEGG   Thioalkalivibrio sp. K90mix: TK90_0256
Entry
TK90_0256         CDS       T01174                                 
Name
(GenBank) ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
tkm  Thioalkalivibrio sp. K90mix
Pathway
tkm00230  Purine metabolism
tkm00240  Pyrimidine metabolism
tkm01100  Metabolic pathways
tkm01232  Nucleotide metabolism
Module
tkm_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
tkm_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:tkm00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    TK90_0256
   00240 Pyrimidine metabolism
    TK90_0256
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tkm03400]
    TK90_0256
Enzymes [BR:tkm01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     TK90_0256
DNA repair and recombination proteins [BR:tkm03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    TK90_0256
SSDB
Motif
Pfam: Ribonuc_red_lgC LAGLIDADG_3 Ribonuc_red_lgN Intein_splicing LAGLIDADG_WhiA UPF0149 Hint
Other DBs
NCBI-ProteinID: ADC70771
UniProt: D3SD26
LinkDB
Position
262235..265504
AA seq 1089 aa
MGDSWQSHDNVISIQGTSPDVSLQPSSYSIWAERYQLRDAHGEPVDASMEAMFDRVARAL
AAVEAPDQRAPIEREFRWALDNGAIPAGRILANAGAEAHKPQTTLINCTVSRTIRDSLQA
ILDANTVAGLTLKAGAGIGYDFSTLRPKGALVAGAGAPTNGPVAFMQIFDQTCRTIGAAG
GRRGAQMATLDIGHPDIERFILAKRRKGRLTQFNLSVLVRDAFLEAVERDDEWALAFPLL
PVEQDGVPASDLVYRDWPVVEDGYRVDDQGRVACRVCRRVRARELWETLMRSTYDVGEPG
VILIDQVNRQNNAWFDEVIRATNPCVTADTWIHTSIGPRQVRDLLGQQFRVRVDGRDYTT
GEQGFVPTGAKQVVRLATAEGYQLKLTADHRLRRVTRYTRYVTETEWCAAARLREGDRVL
LNDHRAHAEWPGEYTHEQGYLLGMLVGDGTLKNDKAVLSVWKLAAVVGTSPDAVSPAGVE
GIMEEVMRSARTLPHRSDFSGWQEVAGRNEFRLSLAALKSLAEEVGMGPGAKSVTPAMEQ
ASSEFCRGFLRGMFDADGSVQGGQQKGVSVRLSQSDMSRLEAVQRMLLRLGIASSIYRNR
RSAGMRHLPDGNGGAKEYAIKAQHELIVRGENLQRFLQQVGFADTDKKRRLEQALARYKR
GLNRERFVARVTKIEPGGIEEVFDVSVPDVHAFDANGLCAHNCGEQPLPPDGACLLGSVN
LTRFVSAPFSADTAFDWERFERVVRVFTRMLDNVADISGLPLPEQRAEMLRKRRHGMGIL
GLGSALAMLGETYGSESAAGFTAEVCRRLALASWRAGLELAREKGPAPIMDEGFTLTADM
LRRQPALAEAGYQVGDVLKGRELHARFSPYMQHVAVQDPALVAALAEEGARFTHATSIAP
TGTISFSVANNASNGIEPTFLHHTTRNIRRPGRRTREAVDCYSYELLAYRALVDPEAGPE
DLPANAITAERVGVDAHIRMQAAAQPWVDSAISKTLNVPSDIPFEGFKEVYLQAWRAGLK
GCTTYRPNPQAQMGVLVDPERLRSTWYTFTLTDGRELTLRGDEEVEYEGQIHTAANLFAA
LDEGYYDDV
NT seq 3270 nt   +upstreamnt  +downstreamnt
atgggcgacagctggcaatcgcatgacaatgtgatatctattcagggcacctctccggac
gtgtcgctgcaaccctcgtcgtattccatctgggccgagcgctatcaattgcgcgatgcg
cacggcgagccggtggacgcctcgatggaggcgatgttcgaccgcgttgcgcgtgcgctg
gcggccgtcgaggcgccggaccagcgcgcgccgatcgagcgcgagttccgctgggcgctg
gacaacggtgccatcccggccgggcggatcctggccaatgccggggccgaggcgcacaag
ccgcagaccacgctgatcaactgcaccgtctcgcgcacgattcgcgattcgctgcaggcc
atcctggatgccaataccgtcgccgggctgacgctcaaggccggggccgggatcggctac
gacttcagcaccctgcgcccgaagggtgcgctggtcgcgggcgccggggccccgaccaac
ggcccggtcgcgttcatgcagatcttcgaccagacctgccgcaccatcggcgcggccggc
ggccgccgcggggcgcagatggcgacactggacatcggccacccggatatcgagcgcttc
atccttgccaagcgccgcaaggggcggctgacccagttcaacctgtccgtgctggtgcgc
gatgcctttttggaggccgtggagcgcgacgacgaatgggcgctggccttcccgctgctg
cccgtggaacaggacggggtgcccgcatccgatctcgtctatcgcgactggccggtggtc
gaggacggctaccgcgtcgacgaccagggccgggtcgcctgccgtgtctgtcgccgcgtg
cgcgcccgcgagctgtgggaaaccctgatgcgcagcacctatgacgtcggcgaacccggc
gtcatcctgatcgatcaggtcaaccgccagaacaacgcctggttcgacgaggtgatccgc
gccaccaacccctgcgttacggcagacacatggatccacacgtctatcgggccgcgtcag
gtgcgagatctgttgggacagcaattccgcgtgagggttgatggccgagactacacaacg
ggcgaacaaggtttcgtcccgactggggcaaagcaggtcgttcgattggctactgctgag
ggttatcagttgaaactgacggccgatcaccggttgcgtcgcgttacccgctacacacgt
tatgtcacggaaacagaatggtgtgcggcggcgcggctgcgcgaaggcgatcgggtgttg
ctcaacgaccatcgcgcccacgccgagtggcctggtgaatacacccatgagcaaggttac
ttgctgggtatgttggtcggtgacggcaccctcaagaacgacaaggcggtgctatcggtt
tggaagctggccgctgttgttggcaccagtcccgatgcggtttccccggcgggggtggaa
gggattatggaagaggtaatgaggtctgcccggaccttgccacatcgcagtgatttttca
ggatggcaggaagtggctggccggaacgaattcaggcttagcctggctgccctaaagtct
ctggcagaagaagttggcatggggccgggcgcgaagtcggttactccggctatggagcaa
gcttcaagcgagttttgtcgaggatttctccgggggatgttcgacgctgatggttccgtt
cagggcggtcagcagaagggtgtcagcgttcgcctctcacagtctgatatgtcgcgtttg
gaagccgtacaacggatgcttctgaggctggggattgcgtcatcaatctacaggaaccgc
cgttcggccgggatgcgccacctgccagacggtaacggcggcgctaaggagtatgcgatc
aaagcgcagcacgagctgatcgtcagaggtgagaacctccaacgctttctccagcaagtc
ggcttcgcggacacggacaagaaacgacgtctggaacaagccctggcccgatacaagcgc
ggcctgaaccgtgagcgtttcgtcgcacgggttacgaagatcgaacccggcgggattgaa
gaagtttttgatgtgtctgttccagatgtgcacgcatttgatgctaacggtttgtgtgcg
cacaactgcggcgagcagccgctgccgccggacggggcctgcctgctgggctcggtgaac
ctgacccgattcgtgtccgcgccgttcagcgccgacaccgccttcgactgggaacgcttc
gagcgggtggtgcgcgtgttcacgcgcatgctggacaatgttgcggacatctccgggttg
ccgctgccagagcagcgcgccgagatgctgcgcaagcgccgccacggcatgggcatcctc
gggctcggttcggcgctggcgatgctgggggagacctacggttcggagtcggctgctggc
ttcaccgcggaggtctgtcgccgcctggcgctggcgagctggcgggccggcctggagctg
gcgcgcgagaagggcccggcgccgatcatggacgagggtttcacgctgaccgcggacatg
ctgcggcggcagccggctctcgccgaggccggctaccaggtgggcgacgtgctgaagggg
cgcgaactgcacgcccgcttcagcccctacatgcagcacgtcgccgtgcaggacccggcg
ctggtcgcggcgctggccgaggagggcgcgcgctttacccacgccacctccatcgcgccc
accggcaccatcagcttttcggtcgccaataatgcgagcaacggcatcgagccgaccttt
ctccaccacaccacgcgcaacatccgtcgcccggggcggcgcacccgcgaggcggtggat
tgctactcgtacgagctgctggcctaccgggcgctggtggatcccgaggcgggcccggag
gatctgcccgctaacgcgatcaccgcggaacgcgtcggcgtggacgcccatatccgcatg
caggcggccgcgcaaccgtgggtggactcggccatctccaagacgctcaacgtcccgagc
gatatcccgttcgaggggtttaaagaggtctacctgcaggcctggcgcgcggggctcaag
ggttgcaccacctaccggccgaatccgcaggcgcagatgggcgtgctggtggacccggaa
cgcctgcgcagcacctggtacacctttaccctgacggacggccgggagctgaccctgcgc
ggcgacgaagaggtggaatacgaaggacagatccacaccgccgcgaatctcttcgccgcg
ctggacgagggctactacgacgacgtctga

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