Thioalkalivibrio sp. K90mix: TK90_0550
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Entry
TK90_0550 CDS
T01174
Name
(GenBank) FAD-dependent pyridine nucleotide-disulphide oxidoreductase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
tkm
Thioalkalivibrio sp. K90mix
Pathway
tkm00010
Glycolysis / Gluconeogenesis
tkm00020
Citrate cycle (TCA cycle)
tkm00260
Glycine, serine and threonine metabolism
tkm00280
Valine, leucine and isoleucine degradation
tkm00310
Lysine degradation
tkm00380
Tryptophan metabolism
tkm00620
Pyruvate metabolism
tkm00630
Glyoxylate and dicarboxylate metabolism
tkm00640
Propanoate metabolism
tkm00670
One carbon pool by folate
tkm00785
Lipoic acid metabolism
tkm01100
Metabolic pathways
tkm01110
Biosynthesis of secondary metabolites
tkm01120
Microbial metabolism in diverse environments
tkm01200
Carbon metabolism
tkm01210
2-Oxocarboxylic acid metabolism
tkm01240
Biosynthesis of cofactors
Module
tkm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
tkm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
tkm_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
tkm_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
tkm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
TK90_0550
00020 Citrate cycle (TCA cycle)
TK90_0550
00620 Pyruvate metabolism
TK90_0550
00630 Glyoxylate and dicarboxylate metabolism
TK90_0550
00640 Propanoate metabolism
TK90_0550
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
TK90_0550
00280 Valine, leucine and isoleucine degradation
TK90_0550
00310 Lysine degradation
TK90_0550
00380 Tryptophan metabolism
TK90_0550
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
TK90_0550
00670 One carbon pool by folate
TK90_0550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tkm04147
]
TK90_0550
Enzymes [BR:
tkm01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
TK90_0550
Exosome [BR:
tkm04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
TK90_0550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox_3
Pyr_redox
FAD_oxidored
Lys_Orn_oxgnase
FAD_binding_2
HI0933_like
NAD_binding_8
3HCDH_N
FAD_binding_3
2-Hacid_dh_C
DAO
AlaDh_PNT_C
UPF0227
Motif
Other DBs
NCBI-ProteinID:
ADC71065
UniProt:
D3SEM0
LinkDB
All DBs
Position
complement(583926..585332)
Genome browser
AA seq
468 aa
AA seq
DB search
MSETFDLAIIGSGPGGYRAAVLGALRGLNVVIVEKGDWGGCCLNRGCVPKKDWYHTARTV
AAQRHFEGRGISGRLKADMARAWDHQKEVVTTVRDSYLGYMKHLKIQYRHGTARFRDAET
LEVATEDGTETVQARHTIIATGATATVPAPFAVEPGRVLTTDMLFNDKPPAGERVAIIGS
GVVATEFAWIFHHLGKKVTWLSRSKPLSTQKFSPQALGTLKEQLAADGIEPVRVKGYDKV
ETSEAGVVITDAEGNTFEVDWVLLGTGRTPHTEGLNLDEIGVKTDARGFVKRRPTLQTDI
DTIYAIGDVASEWQTANHALADATIAVENIQNGNTREQDERFVPIAIYSAVEMARLGLDE
DDAEDEELEPAVGFAAFETSPRALGQDEPEGFVRLIGDMDTGALLGGEVIGADAGELIHI
LSLAPDRDTALSWIARGQWNHPTRAEEFLNATETLASKWNLKSEIFGL
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagacctttgacctggccatcatcggaagtggccccgggggctatcgtgccgcc
gttctgggcgccctgcgcgggctcaacgtcgtcatcgtcgaaaagggcgactggggcggc
tgctgcctgaaccgcggctgcgtgccgaagaaggactggtaccacaccgcacgcaccgtc
gccgcgcaacgccacttcgagggccgcggcatcagcggccgcctcaaggccgacatggcc
cgcgcctgggaccatcagaaggaggtcgtgaccaccgtgcgcgactcctacctcggctac
atgaagcacctgaagatccagtaccgccacgggactgcccgcttccgcgatgccgagacc
ctcgaggtcgcgacggaggatggcaccgagaccgtccaggctcgccacaccatcattgcc
accggcgccaccgccaccgtcccggccccgttcgcggtcgagcccggccgcgtactgacc
accgacatgctgttcaacgacaagccaccggcgggcgagcgcgtcgcgatcatcggttcc
ggcgtggtcgccaccgagttcgcctggatcttccaccatctcggcaagaaggtgacctgg
ctgtcgcgctccaagccgctgtccacccagaagttcagcccgcaggcgctgggcacgctg
aaggagcagctggccgcggacggcatcgagcccgttcgggtcaagggatatgacaaggtc
gagacctccgaggctggcgtggtcatcaccgacgccgagggcaacaccttcgaggtcgac
tgggtcctgctcggcaccgggcgcaccccgcataccgagggcctgaacctcgacgaaatc
ggggtgaaaaccgacgcccgcggcttcgtgaagcgccgccccaccctgcagaccgatatc
gacaccatctacgccatcggcgatgtcgcgagcgaatggcagaccgcgaaccatgccctg
gcggacgcgaccatcgcggtggagaacatccagaacggcaacacccgcgagcaggacgag
cgcttcgtaccgatcgcgatctattccgcggtggagatggcgcgcttggggctcgacgag
gacgacgccgaggacgaggagctggagccggcggtcggcttcgccgccttcgagacctcc
ccgcgcgcgctgggccaggacgagccggagggcttcgtccgcctgatcggcgacatggat
accggggccctgctgggcggcgaggtgatcggcgccgacgccggcgagttgatccacatc
ctgtcgctggcccccgatcgcgataccgcgctgtcctggattgcccgcggccagtggaac
cacccaacccgcgccgaggaattcctcaatgcaacggagaccctcgcctcgaagtggaac
ctgaagtcggagatcttcgggctttag
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