Thioalkalivibrio sp. K90mix: TK90_0673
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Entry
TK90_0673 CDS
T01174
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tkm
Thioalkalivibrio sp. K90mix
Pathway
tkm00061
Fatty acid biosynthesis
tkm00071
Fatty acid degradation
tkm01100
Metabolic pathways
tkm01212
Fatty acid metabolism
tkm02024
Quorum sensing
tkm04146
Peroxisome
Module
tkm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tkm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
TK90_0673
00071 Fatty acid degradation
TK90_0673
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
TK90_0673
09145 Cellular community - prokaryotes
02024 Quorum sensing
TK90_0673
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tkm01004
]
TK90_0673
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tkm04147
]
TK90_0673
Enzymes [BR:
tkm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
TK90_0673
Lipid biosynthesis proteins [BR:
tkm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
TK90_0673
Exosome [BR:
tkm04147
]
Exosomal proteins
Exosomal proteins of breast milk
TK90_0673
Exosomal proteins of breast cancer cells
TK90_0673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Lentiviral_Tat
Motif
Other DBs
NCBI-ProteinID:
ADC71188
UniProt:
D3SFF8
LinkDB
All DBs
Position
complement(716618..718426)
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AA seq
602 aa
AA seq
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MSDSAIRPDQAPTLPSLFRVRVEQTPDAPAYRHYNTAREAWQQTSWREMGAMVDRWQAAL
AAEGLKPGERVALMLGNSREWVAFDQAAMGLGLVPVPLYTDDRPDNVAYIIGQTQARILL
LGESAHSRRLSEHFENMPSLRRIVNIGGEDTEPDDDRVTELEDWLTRHEATEFHHPDLDP
EAMATIVYTSGTTGRPKGVILSHRNILENAWASSQAGPLSPADRFLSFLPLSHMLERTAG
LYMPMLIGAEVAFARSIQALGEDLVNVRPTVLISVPRIYERVHGRIQAGLKQKSGLGRAL
FKATVSIGWKRFEHQQGRGGWSPGFLLWPVLERIVARKVLDRLGGELRFAVCGGAPLPPP
IAQFFIGLGLPVLHGYGMTEASPVVTVNTPDDNLPASIGKPLPGVEIRIGEMDELLTRSP
CVMLGYWKNEEATRETIDEDGWLHSGDQARIDDSGHVFITGRIKDILVLTNGEKVPPADM
EMAIALDALFDQVMIVGDNRSFLTALVVPEPEAWASFASDHDLDAETEGRLPRKAERALL
QRIQYQLRDFPGYAKIRHVHVTHEAWSVDNGMLTPTMKLKRPVIVEHYSEAIEAMYAGHD
GR
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattccgcgatccgtcccgaccaggccccgaccctcccctcgctgttccgtgtc
cgtgtcgaacagacaccggatgccccggcctaccgccactacaacaccgcgcgcgaggcg
tggcagcagacctcctggcgcgagatgggcgcgatggtggatcgctggcaggccgcactg
gccgcggagggcctcaagcccggcgagcgtgtcgcattgatgctcggcaactcgcgcgag
tgggtcgcgttcgaccaggcggcgatggggctggggctggtcccggtcccgctgtacacc
gacgatcgtccggacaacgtcgcctacatcatcggccagacgcaggcacgcatcctgctg
ctgggcgagagcgcccacagccgccggctgtccgagcacttcgagaacatgccgtcgctg
cggcgcatcgtgaacatcggcggcgaggacacggagccggacgacgaccgcgtgaccgag
ctggaagactggctcacgcggcacgaagccaccgaattccaccacccggacctcgatccg
gaggccatggccacgatcgtctatacgtccggcaccaccgggcgccccaagggcgtaatc
ctctcgcaccgcaacatcctggagaacgcctgggcctcctcgcaggccggcccgctgtcg
cccgccgaccggtttctgtcgttcctgccgctgtcgcacatgctggaacgcaccgccggg
ctgtacatgcccatgctgatcggtgccgaggtcgccttcgcgcgctccattcaggccctg
ggagaggacctggtcaacgtgcgccccaccgtgctgatctcggtgccgcgcatctacgaa
cgcgtacatggccgcatccaggcggggctaaaacagaaatcgggcctcggccgcgccctg
ttcaaggcaaccgtcagcatcggctggaagcgcttcgagcaccagcagggccggggcggc
tggtcccccggtttcctgctctggcccgtactggagcgcattgtcgcgcgcaaggtgctg
gaccgcctgggcggcgagctacgcttcgcggtctgcggcggcgctcccctgcccccacca
atcgcccagttcttcatcggcctgggcctgccggtactgcacggatacggaatgaccgag
gccagcccggtggtcaccgtgaacaccccggacgacaacctccccgcctcgatcggcaag
ccgctgcccggagtggaaatcaggatcggcgagatggacgaactgctcacccgcagccct
tgcgtgatgctcggctactggaagaacgaggaggccacccgcgagaccatcgacgaagac
ggctggctgcacagtggcgaccaggcccgcatcgacgacagcgggcatgtattcatcacc
gggcgcatcaaggacatcctggtgctgaccaacggcgagaaggtcccgccggccgacatg
gagatggcgatcgcgctggatgcgctgttcgaccaggtgatgatcgtgggcgacaaccgc
tccttcctgaccgcgctggtcgtgccggagccggaggcctgggcctcttttgccagcgac
catgacctcgacgccgagaccgagggccggctgccacgcaaggccgaacgcgccctgctg
cagcgcatccagtatcagctacgcgacttccccggctacgccaagatccgccatgtgcat
gtgacccacgaggcctggtccgtggacaacggcatgctgaccccgaccatgaagctcaag
cgcccggtgatcgtcgagcactacagcgaggccatcgaggcgatgtacgccggccacgac
ggtcgctaa
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