Thioalkalivibrio sp. K90mix: TK90_0727
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Entry
TK90_0727 CDS
T01174
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tkm
Thioalkalivibrio sp. K90mix
Brite
KEGG Orthology (KO) [BR:
tkm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tkm03016
]
TK90_0727
Enzymes [BR:
tkm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
TK90_0727
Transfer RNA biogenesis [BR:
tkm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TK90_0727
Prokaryotic type
TK90_0727
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ADC71242
UniProt:
D3SFL2
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All DBs
Position
781472..782431
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AA seq
319 aa
AA seq
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MARARREVDGILLLDKPRGPSSTQVLGRVKYLLQARKAGHTGALDPRATGLLPLCFGQAT
KVSGWLLDADKHYVAEAQLGVETDSADLDGAIIREAPVPAIEPERLRALEQQFSGAQEQV
PPMVSALKHDGQRLYELARRGVEVERPPRPVQIHALSIEAIAPERLRIDVRCSKGTYVRS
LVVDIGHALGCGAAVDSLRRIGHGPFEAAAMVTMEQVEAAFEAGGAAAIEAMLQAPETAL
GHWPSVSLNAQASAAMRHGHPADPEAIESRTPGTEGAPVEAESGWPLVRVYDAEGGFLAV
GAREPDGRVRPRRLFVPAP
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgcacgtcgcgaggtcgacggtattctgctgctggataagccccgcgggccg
agttctacccaggtcctggggcgcgtgaagtatctgttgcaggccaggaaggccggccac
accggggcgctggacccacgggcgaccggccttttgccactgtgcttcgggcaggcgacc
aaggtctcgggctggctgttggacgctgacaagcactatgtcgccgaggcgcagctgggg
gtcgagaccgacagcgccgatctcgatggcgcgatcatccgcgaggcgccggtgccggcc
atcgagccggagcggctgcgggcgctggaacagcagttcagcggggcgcaggagcaggtg
ccgccgatggtctcggcccttaagcacgatggccagcggctctatgagttggcgcgccgg
ggcgtggaggtcgagcgccccccgcggcccgtgcagatccatgccctgtccatcgaagcc
atcgcgcccgagcggctgcgtatcgacgtgcgctgcagcaagggcacctatgtgcgttcc
ctggtggtcgacatcgggcatgcactgggttgcggggcggcggtcgacagcctgcggcgc
atcggccacggcccgttcgaggccgccgcgatggtgacgatggagcaggtggaagccgca
ttcgaggcggggggtgcggccgcgatcgaggccatgctgcaggccccggaaacggcactg
ggacactggccttcggtgtccctcaatgcccaggccagcgcggccatgcgccatggtcac
ccagcggatcccgaggcgatcgaatcccggaccccgggtacggaaggcgcgccggtcgag
gccgaaagcggctggccgctggtccgggtgtatgacgccgagggtggttttctggcggtc
ggtgcgcgcgaaccggacggccgggtgcggccacgccggctgtttgtcccggccccctga
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