Thioalkalivibrio sp. K90mix: TK90_0821
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Entry
TK90_0821 CDS
T01174
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
tkm
Thioalkalivibrio sp. K90mix
Brite
KEGG Orthology (KO) [BR:
tkm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tkm03400
]
TK90_0821
Enzymes [BR:
tkm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
TK90_0821
DNA repair and recombination proteins [BR:
tkm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
TK90_0821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
ADC71336
UniProt:
D3SFV6
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All DBs
Position
complement(878365..879942)
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AA seq
525 aa
AA seq
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MDSGQPPTANDHPTRLLVVLGDQLAQPHPALEALHPSRDALWMAEVPGESLHVRSHTART
VLFLSAMRHFARRQREDGWTLHYHALGEHRHHTLESVLEADLRRLRPCEVQVLQPGEIRV
QRGLEAACRSAGVTLTVLPDPLFLVSLEAFSEWAGARKQLRMEYFYRDQRRRLDVLMEGG
GPAGGQWNFDAENRRHFGREGPGRLPTPKAFPPDALTRKVIQTIAEQLPDLPGRCEDFDW
PVTPAQAREALDDFIAHRLPHFGQYQDAMWSGEPWLYHARLSAALNLHLLGPREVIAAAE
GAWHSGHTPLAAAEGFVRQILGWREYVRGLYFHFGERWHEWNALEAGEPLPALYWDANTE
MHCLHEAIGQTLRLGYAHHIQRLMVTGLFAQLLGVQPAAIHGWYLGIYVDAVEWVEMPNV
IGMSQHADDGRMASKPYVATGRYIQRMSNYCTQCRYHPTEALGDDACPFTTLYWDFLDRH
RDRFANHPRTALQWKHVEKMDTERLQAIRTQAAAIRERLRQGERL
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
gtggactccggccaacctccgaccgcaaacgaccacccgacgagattactggtggtccta
ggtgaccagctcgcccagccacaccccgctctggaggccttgcacccgtcccgtgacgcc
ctgtggatggccgaggtgccgggcgaatcgctgcatgtccggtcacacaccgcccgtacg
gtgctgttcctctcggcgatgcgacacttcgcccggcgccagcgcgaggacgggtggacg
ctgcactaccatgccctgggcgaacacaggcaccacacgctcgagtccgtcctggaggcc
gatctgcgccgcctgcgtccgtgcgaggttcaggtcctgcaacctggcgaaatccgcgta
cagcgcggactggaggcggcctgccgcagcgccggggtcacgctcaccgtcctgcccgac
ccgctgttcctggtatcgctcgaggcattctccgagtgggccggggcccgcaagcaactg
cggatggagtatttctaccgcgaccagcgccgccgccttgatgtactgatggagggcggc
ggacccgccggcggccagtggaacttcgacgccgagaaccggcggcatttcggccgcgaa
ggccccggccggctgccaacgccaaaagccttcccgcccgacgccctcacgcgcaaggtg
atccagaccatcgccgagcagctgcccgacctccccggccgctgcgaggacttcgactgg
ccggtcacacccgcacaggcgcgcgaggccctggatgatttcatcgcccatcggctgcca
cacttcggccaataccaggacgcgatgtggagcggcgagccctggctgtaccacgcccgc
ctgtccgccgcactgaatctgcacctgctcggcccgcgcgaggtaatcgctgcggcggaa
ggcgcctggcacagtggccataccccgctggccgctgcggaaggctttgtccgtcagatc
ctgggctggcgcgagtatgtgcgcggcctgtatttccatttcggcgagcgctggcacgag
tggaacgcgctcgaagccggggagcccctgccggcgctgtactgggatgccaacaccgag
atgcactgcctgcacgaagccatcgggcagaccctgcgtcttggctatgcccaccacatc
cagcgcctgatggtcaccggcctgttcgcgcagctgctgggggtacaaccggccgccatt
cacgggtggtatctgggcatctacgtcgatgcggtggaatgggtggagatgccgaacgtc
atcggcatgtcgcagcacgccgatgacggccgcatggcctccaagccctatgtcgccacc
gggcgctacatccagcgcatgagcaactactgcacgcagtgtcgctatcacccgaccgag
gcgctgggcgacgacgcctgtccattcacaaccctctactgggacttcctcgatcgccac
cgcgatcgcttcgcgaatcatccgcgcaccgcgctgcagtggaagcacgtcgagaagatg
gacaccgaacgccttcaggccattcgcacacaggccgccgcgatccgcgaacggctgcgc
cagggggagcgactctga
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