Thioalkalivibrio sp. K90mix: TK90_1204
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Entry
TK90_1204 CDS
T01174
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
tkm
Thioalkalivibrio sp. K90mix
Brite
KEGG Orthology (KO) [BR:
tkm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tkm03032
]
TK90_1204
03400 DNA repair and recombination proteins [BR:
tkm03400
]
TK90_1204
Enzymes [BR:
tkm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
TK90_1204
DNA replication proteins [BR:
tkm03032
]
Prokaryotic type
DNA Topoisomerases
TK90_1204
DNA repair and recombination proteins [BR:
tkm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TK90_1204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ADC71713
UniProt:
D3S9K8
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Position
1281932..1284544
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AA seq
870 aa
AA seq
DB search
MAEFAKEIFPVNLEDEMQQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMRELGNDYN
KPYKKSARVVGDVIGKYHPHGDSAVYDAIVRMAQPFSMRYMLADGQGNFGSIDGDSPAAM
RYTEVRMARIAAELLADIDKETVDFIDNYDGSETEPAVLPSKFPNLLVNGSAGIAVGMAT
NIPPHNLREVINACVALIDDPEISIEGLMEHVPGPDFPTAGIINGVEGVREAYRTGRGRV
LIRARSHVEPLEGGQREAIVVTELPYQVNKARLTEKIAELVKEKRIDGISELRDESDKDG
MRLVIELKRGEMAEVVLNHLYMHTQMQNVFGINIVALVDGQPKVLDLRQVLESFLRHRRE
VVTRRTIFDLRKARERAHILEGLAIALANIDPVIELIRAAPNPAEAKAGLLARSWPLGVV
SDMLDRAGASASRPEDLAADYGVGDDGYRLSEAQAQAILDLRLHRLTGLEQDKILDEYRE
LLDLIEDLLDILGSGERLQQEIRNELLAVAEQFGDERRSEIRERQANLTLEDLIGEEDVV
VTLSHAGYVKYQPVADYRAQRRGGRGKAAASFKEEDFVDRLLVANTHDTVLCFSSRGRVY
WLKVYELPQGSRASRGKPIVNLLPLEADERINAILPVREYDPDHYVFMVTARGTVKKTPL
TDFSRRRSTGIIAVDLRDDDYLVDVSLTDGQMDVMLVTTAGKAVRFSENDVRPMGRTACG
VRGVRMESDHRVIALLNVAEGAALLATENGYGKRTRFDEFPVHRRGGQGVIGIQTEGRNG
PLVGAARVLEDDEAMLITTGGTLVRTPVDQIPLIGRNTQGVRLIRLDEGERLVELARVEK
LQGEDEDLDDDSDSEDDESTQNTMDNGDPE
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatttgccaaggaaatcttcccggtcaatctcgaagacgagatgcagcagtcc
tacctcgattacgcgatgagcgtaatcgtgggccgggccctccccgatgtccgtgacggc
ctcaagccggtccatcgccgcgtgctctacgcgatgcgcgagctgggcaacgactacaac
aagccgtacaagaagtcggcgcgcgtggtcggtgacgtgatcggtaaataccacccgcat
ggtgactccgccgtctacgacgccatcgtgcgcatggcgcagccgttctcgatgcgctac
atgctggccgacgggcagggcaacttcggctccattgacggtgattccccggccgccatg
cgttataccgaggtgcgcatggcgcgcatcgcggccgagctgctggccgatatcgacaag
gaaaccgtcgacttcatcgacaactacgacggctccgagacggagccggcggtactgccg
agcaagtttcccaacctgctggtcaacggctccgccgggatcgcggtggggatggcgacc
aacatcccgccgcacaacctgcgcgaggtgatcaacgcctgtgtggcgctgattgatgac
ccggagatctccatcgaaggtctgatggagcacgtgccgggccccgatttcccgacggcc
gggatcatcaacggcgtggaaggcgtgcgcgaggcctatcgcactggtcgtggccgggtg
ctgatccgggcgcgctcgcatgtcgagccgctggagggcggacagcgcgaggcgatcgtc
gtcaccgaactcccgtaccaggtgaacaaggcccgcctgaccgagaagatcgccgagctg
gtcaaggaaaagcgcatcgacggcatctcggagctgcgcgacgagtcggacaaggacggc
atgcgcctggtcatcgagctcaagcgcggcgagatggccgaggtggtcctgaaccacctg
tacatgcacacgcagatgcagaacgtcttcggcatcaacatcgtcgccctggttgacggc
cagccgaaggtgctggatctgcgtcaggtgctggagtcctttctgcggcatcgccgcgag
gtggttacccgccgcacgatcttcgacctgcgcaaggcgcgcgagcgcgcccatatcctg
gaaggcctggcgatcgcgctggccaacatcgacccggtgatcgaactgatccgtgccgcc
cccaacccggccgaggccaaggccggcctgctggcgcgcagctggccgctgggcgtggtc
agcgacatgctcgaccgggccggggccagcgcctcgcgtccggaggatctggcagcggac
tacggcgtgggcgacgacggctatcgcctgtccgaggcccaggcgcaggcgattctggat
ctgcgcctgcaccgcctgaccgggctggaacaggacaagatcctcgacgaataccgcgag
ttgctggacctgatcgaggacctgctcgacatcctcggctcgggtgagcgcctgcagcag
gagatccgcaacgaactgctggccgtggccgagcagttcggcgacgaacgccgtagcgag
atccgcgagcgccaggcgaacctcaccctggaagacctgatcggcgaggaagacgtcgtg
gtgacgctctcccacgccggctatgtgaagtaccagccggtggccgactaccgcgcgcaa
cgccgaggcggtcgcggcaaggcggccgcgagcttcaaggaagaggactttgtcgaccgg
ttgctggtcgcgaacacgcacgacacggtgctgtgtttctccagccgcgggcgggtctac
tggctgaaagtctatgaactgccacagggttcgcgcgcctcgcgtggcaagccgatcgtg
aatctgctgccgctggaagcggacgagcgaatcaacgccatcctgccggtgcgcgagtac
gacccggaccactatgtgttcatggtgaccgcgcgcggaacggtcaagaagaccccgctg
accgacttctcgcgccgccgctcgaccgggatcatcgcggtggatctgcgcgacgacgat
tacctggtggacgtttcgcttaccgatggccagatggacgtaatgctcgttaccacggcc
ggcaaggcagtgcgcttctccgagaacgacgtgcggccgatgggccgtaccgcctgcggt
gtgcgcggcgtgcgcatggaatcggatcatcgcgtgattgcgctgctcaatgtcgccgag
ggtgccgccttgctggccaccgagaacggctacggcaagcggactcgcttcgacgaattc
ccggtccaccgtcgtggcggccagggcgtgatcgggatccaaaccgaggggcgcaacggg
ccactggtcggggccgcgcgcgtgctggaagacgacgaggcgatgctgatcaccacgggc
ggtacgctggtgcgtacaccggtggaccagatcccgctgatcgggcgcaatacgcagggt
gtgcggctgatccgcctggacgagggcgagcgcctggtggaactggcccgggtcgaaaag
ctgcagggcgaggatgaagacctggacgacgacagcgacagcgaggacgacgaatccacg
cagaacaccatggacaacggagatccggaatga
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