Thioalkalivibrio sp. K90mix: TK90_1297
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Entry
TK90_1297 CDS
T01174
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
tkm
Thioalkalivibrio sp. K90mix
Pathway
tkm00550
Peptidoglycan biosynthesis
tkm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tkm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TK90_1297
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tkm01003
]
TK90_1297
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tkm01011
]
TK90_1297
Enzymes [BR:
tkm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
TK90_1297
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
TK90_1297
Glycosyltransferases [BR:
tkm01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
TK90_1297
Peptidoglycan biosynthesis and degradation proteins [BR:
tkm01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
TK90_1297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
UvrB_inter
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
ADC71805
UniProt:
D3S9V0
LinkDB
All DBs
Position
complement(1373043..1375385)
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AA seq
780 aa
AA seq
DB search
MPRKRMTRSRRGARSGGLRHFFGAGVWLFAGLALAGIGVGAIYVVSLDQEIRERFEGQRW
ALPARVYARPLELYEGRALTPQALETELETLNYRSSAQGSGPGEYRVDGNRVSFTTRPFT
FGDGPEPAHSVRVDFSDGRVQSVQKQGNGERVDLMRVEPLLIGSIYPTHGQDRILVAIDE
VPRELIGALLAIEDRRFMSHRGVDPAGIARAAMANLRAGRTVQGGSTLTQQLVKNFYLTR
DQTLARKANEAVMALLLERRYSKREILEAYINEVYLGQSGERAIHGFGQASQFYYQRPLN
ELRLDQLALLVGLARGASYYDPRRHPQRAKARRDQVLRAMLETGLADADQIEAALDTELD
VSPVVPQGRSRFPAFLDMVRRELRADYADEDLRSEGLRIFTTMDPVVQLTLEERLKAGVD
RVIEQRGSNLERLQAAAVVTDPQAGEVLAVVGDRNPQYPGYNRAVEAQRQVGSVLKPFVY
LAALTQPGRYTLASLLDDSPMTIQLPHGEPWTPRNFDREHRGDVTAWEALVQSYNVATVQ
LAQEIGISQLIDVLQTLGLQRTPAPLPSLALGAIELSPLEVAGLYQALANGGYATGTRAI
RDVLDLEDEVLSHYGLELRGAVPDGAVSLLTHALHDVTTEGTGRQISQRLPGRVVAGKTG
TTNNFRDSWFAGFDDRHVTVVWLGMDDNEATGLTGGVAAAPIWADVMAGLGAQSLQLGRH
PEIAYQEIDLKSGLRVEQDDHACEAVKTLPFWQNSIPESRADCDTGRTPDERGFFERLFR
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgccccgaaaacgtatgacccgttcccgccgaggtgcccgatccggaggcctgcgccat
ttctttggtgccggggtgtggctgttcgccggtctggcgctggccggtatcggggttggg
gcgatctatgtcgtctcgctcgatcaggagattcgcgagcgcttcgagggccagcgctgg
gccttgccggcgcgcgtctacgcgcgaccgctggagctgtacgagggccgggcacttacg
ccccaggcgctggaaaccgaactggagacactgaactaccgcagtagtgcacagggaagc
ggcccgggcgagtatcgcgtggacggcaaccgggtgtcgtttaccacgcgcccgttcacc
tttggcgacggtccggagccggcccattcggtgcgagtggatttttcggatggaagggtg
cagtccgtccagaagcaagggaacggtgagcgcgtcgatctgatgcgggtcgagcccttg
ctgatcgggagcatctacccgacccatggccaggatcgcatcctcgtggccatagacgag
gtgccgcgggagctgatcggcgcgctgcttgcgatcgaggatcgtcgcttcatgtcgcac
cgcggggtagacccggcgggtattgcccgggcggccatggcgaacctgcgcgcggggcgg
acggtgcagggtggcagtacgctgacgcagcagctggtcaaaaacttctacctgacacgg
gaccagacgctggcgcgcaaggcgaacgaggcggtcatggccttgttgctggagcggcgc
tactccaagcgggaaatcctcgaggcctatatcaacgaggtctacctgggtcagtcgggc
gagcgcgcgatccacggattcggccaggcctctcagttctactaccagcggcccctgaac
gagctgcgcctggaccagctggcgctgctggtgggactcgcccgcggtgcgagctactac
gatccgcgtcgtcacccccagcgtgccaaggcgcgccgtgatcaggtgttgcgcgcgatg
ctggagaccgggttggccgatgccgaccagatagaggccgcactggataccgaactcgat
gtgtctcccgtggtgccgcagggccgcagccgattcccggcgttcctcgacatggtgcgt
cgcgagttgcgcgccgactacgcggacgaggacctgcgcagcgagggtctgcgcatattc
accaccatggacccggtcgtgcagctcacgctggaggagcgcctgaaggcgggggtggat
cgggtgattgagcagcgcgggtccaacctggagcggctacaggcggcggccgtcgtgacc
gacccgcaggcgggagaggtccttgcggtggtgggggatcgcaatccgcagtatcccggc
tataaccgggcggtcgaggcgcagcggcaggtcgggtcggtgctcaagcccttcgtctac
ctggcggcgctcacgcaacctgggcgctatacgctggcgagcctgctcgatgacagccca
atgaccatccagctgccgcatggcgagccctggacgccgcgcaatttcgaccgcgaacac
cgcggcgacgtaacggcctgggaggcgctggtccagtcgtacaacgtcgccacggtccag
ctggcacaagagatcggtatttcgcagctgatcgacgtattgcagacgctcggtttgcag
cgcaccccggccccgttgccctcgctggcccttggggcgatcgagttgtcgccactggag
gtggccgggctttaccaggcgctcgccaatggcggctatgcgaccggcacccgtgccatt
cgcgatgtcctcgacctggaggacgaggttctgtcccactacgggctggaactgcgcggt
gccgtacccgatggcgcggtcagcctgctgactcacgccctgcatgatgtgaccaccgag
gggaccgggcggcagatcagccagcgcctcccggggcgtgtcgtggccggcaagaccggc
accacgaacaacttccgcgatagctggttcgccgggttcgatgatcgccacgtcacggtc
gtctggctggggatggacgacaacgaggcgaccggcctgaccggaggtgtggctgcggct
cccatctgggccgatgtgatggccggtcttggcgcacagtcgctgcagctaggccgtcat
cccgagattgcctatcaggagattgacctgaagtccggcctccgcgtcgagcaggacgat
catgcctgcgaggcggtgaaaacgctcccgttctggcagaattccatccccgagagccgt
gccgactgcgacacgggccgtaccccggatgagcggggcttttttgagagattgttccgc
taa
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