Thioalkalivibrio sp. K90mix: TK90_1480
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Entry
TK90_1480 CDS
T01174
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tkm
Thioalkalivibrio sp. K90mix
Pathway
tkm03030
DNA replication
tkm03430
Mismatch repair
tkm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tkm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TK90_1480
03430 Mismatch repair
TK90_1480
03440 Homologous recombination
TK90_1480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tkm03032
]
TK90_1480
03400 DNA repair and recombination proteins [BR:
tkm03400
]
TK90_1480
Enzymes [BR:
tkm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TK90_1480
DNA replication proteins [BR:
tkm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TK90_1480
DNA repair and recombination proteins [BR:
tkm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TK90_1480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
P63C
Motif
Other DBs
NCBI-ProteinID:
ADC71984
UniProt:
D3SAC9
LinkDB
All DBs
Position
complement(1572414..1575893)
Genome browser
AA seq
1159 aa
AA seq
DB search
MSGAWHDPGFVHLRVHSEYSLIDGLVRLKPLVAAVAEKGMPAVAVTDHCNLFGLVKFYRA
AIAQGVQPIIGADLLVRDARADGSVARMTLLAQNDPGYRNLTRLISRAWQEGQEKGIPRI
DAEWLDSAAEGLIALSGGIDGLFVSGSGVARVLTHDDLAPWLKRFPGRFYLELTRTERPG
EEAWIEQALAAAEQFELPVVATNDVRFLKAEDFEAHEARVCIHDGTTLDDPSRPRRYSEH
QYLATPQEMTERFSDIPEALANSVAIARRCSVSLTLGESVLPDFPVPEGYTVEDHLRETS
AKGLEARLERFQFAERSEYEERLKLELDVICQMGFPGYFLIVADFIQWAKDNGIPVGPGR
GSGAGSLVAYVLGITDLDPLRYELLFERFLNPERVSMPDFDVDFCMEKRDDVIDYVAERY
GRDKVSQIITHGTMAAKAVVRDCGRVLGYGYGFVDRIAKLIPFELGMTLDKALAESEDLK
SQYDQDEEVRGIIDLARKLEGLTRNAGKHAGGVVIAPSALTDFSPLYCEDDGGSLVTHFD
KDDVEAVGLVKFDFLGLRTLTIIDWAVENVRKMDPETRIDLDAVPLDDPDTFKLLKAYQT
TAVFQLESGGMKDLIRRLQPDSFEDIIALVALYRPGPLQSGMVDDFIDRKHGRAQVEYPH
PDLEPILQPTYGVILYQEQVMQIAQVLANYTLGGADLLRRAMGKKKPEEMAKQRQIFMEG
ALGRGVEEGTATYIFDLMEKFAGYGFNKSHSAAYALVAYQTAWLKAHYPAPFMAAVLSAD
MDNTDKVVGLIEECRNMGLEVLPPDVNQSDYRFTCRDAGTVVYGLGAIKGVGESAIETLL
KARAVDGPFHGLIDLCQRVDLSKLNKRVLETLVRAGALDAIGANRATLLNDIPTAVAAAE
QTERNASLGVVDLFGDPAAAVVPESETLPEMEDDDRLRGEKETLGLYLTGHPVERYRAEL
KRLTGSTFAELEAKLEQRPDEGGQQGRRGRQETVRIAGLVVGVRVRNTQNGRMGIATLDD
RSGRAEIVLFNDDFTTYRDRLEPDTLLVAEGTVALDDYAGGIRMRARAVYTLDEARAQWA
RALHLCLEGVRAEQVENLRGLMQEHRDGQCRVHLCYRRDGLEAELSLPEGWAIRPDERLL
RNLQQTLGPGCEAQVLYGR
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgcatggcacgaccccggttttgtgcacctgagggtgcactccgagtactcg
ctgatcgacgggctggtgcgcctgaagccgctggtcgcggcggtcgcggagaagggcatg
cccgcggtcgcggtgaccgatcactgcaacctgttcggactggtgaaattctaccgggcg
gccattgcccagggcgtgcagccgatcatcggggccgatctgctggtgcgggacgcccgc
gcagacgggagcgtggcgcgcatgacgctgcttgcgcagaacgaccccggctaccgcaac
ctcacccgactgatctcgcgggcctggcaggaaggtcaggaaaagggcatccctcggatc
gacgcggaatggctggatagcgcggccgagggcctgatcgcgctgtcgggtggcatcgat
ggtctgttcgtgagcggctcgggcgtcgcgcgcgtattgacccacgatgatcttgccccc
tggctgaagcgttttcccgggcgcttctatctggagctgacgcgcaccgagcgcccgggc
gaggaggcctggatcgagcaggccctcgcggcggcggaacaattcgagctgcccgtggtg
gcgaccaacgacgttcgcttcctgaaggccgaggacttcgaggcccacgaggcgcgcgtc
tgtatccatgatggcaccacgctggatgacccctcgcgcccgcggcgctactccgagcat
cagtacctcgccaccccgcaggagatgacggaacgcttctcggatatccccgaggccctg
gcgaactcggtggcgatcgcccggcgctgcagtgtcagcctgacgctcggggagtcggtg
ttgccggatttcccggtgccggagggctacacggtcgaggatcatctgcgcgagacctcg
gcgaaggggctcgaggcccggctggaacgttttcagtttgccgagcgctcggagtacgag
gaacgcctgaagctcgaactggacgtgatctgccagatgggtttccccggctacttcctg
atcgtggccgactttatccagtgggccaaggacaatggcattccggtggggccggggcgt
ggatcgggcgcgggttcactggtcgcctatgtgctgggtattactgatctggatccattg
cgttacgagctgctttttgagcgatttcttaatccagagcgcgtgtccatgcctgacttc
gatgtcgatttctgcatggagaaacgcgatgacgtgatcgactacgtggccgagcgctac
gggcgcgacaaggtctcgcagatcatcacccacggcaccatggccgcgaaggcggtcgtg
cgcgactgtggtcgtgtactgggctatggctacggatttgtcgaccgcatcgccaagctg
atcccgttcgagctgggcatgaccctggacaaggccctggccgagagcgaggacctgaag
tcgcagtacgatcaggacgaggaggtgcgcgggatcatcgatctggcgcgcaagctcgag
ggactcacccgcaatgcgggcaagcacgccggcggcgtggtgatcgccccctcggcgctg
accgacttctcgccactgtactgcgaggacgatggtggctcgctggtgacccacttcgac
aaggacgacgtcgaggccgtgggtctggtgaagttcgactttctggggctgcgcacgctg
acgatcatcgactgggcggtcgagaacgtgcgcaagatggaccccgagacccgtatcgac
ctggatgcggtcccgctggatgaccccgacaccttcaagctgctgaaggcctaccagacc
accgcggtgttccagctggaatcgggcgggatgaaggacctgatccggcgcctgcagccg
gacagcttcgaggacatcatcgcgctggtggccctgtaccggccgggcccgctgcagtcg
gggatggtggatgacttcatcgaccgcaagcatggtcgcgcgcaggtggaatacccgcat
ccggatctggagccgatcctgcagccgacctacggggtcatcctgtaccaggagcaggtg
atgcagatcgcccaggtcctggcgaactatacgctcggcggcgctgacctgctgcgacgc
gcgatgggcaagaagaagcccgaggagatggccaagcagcgccagattttcatggagggt
gcgctggggcgcggggtcgaggaggggaccgcgacctatatcttcgacctgatggagaag
ttcgccggctacggcttcaacaagtcgcactcggccgcctatgccctggttgcgtatcag
accgcctggctgaaggcgcattacccggcgccgttcatggccgcggtgttgtccgcggat
atggacaacaccgacaaggtcgtgggcctgatcgaggaatgccggaacatgggcctggag
gtcctgccgccggacgtgaaccagtcggactaccgctttacctgccgcgatgccgggacg
gtggtctatggcctcggggcgatcaagggtgtgggcgagtcggcgatcgagacactgctg
aaggcgcgtgcggtggatggtcccttccacgggctgatcgacctgtgccagcgcgtggac
ctgtccaagctgaacaagcgcgtgctggagacgctggtgcgtgcgggtgcgctggatgcg
atcggcgcgaaccgcgcgacgctgctgaacgacatccccaccgccgtggccgcggcggag
cagaccgagcgcaacgcgagcctgggggtggtggatctgtttggcgacccggcggcggcc
gtggtccccgagagcgagaccctcccggaaatggaggatgatgaccgcctgcgcggggag
aaggagacgctgggcctgtacctgaccgggcacccggtcgaacgctatcgtgcagaactc
aagcggctgacgggcagcacgttcgccgaactggaggcgaagctggagcagcggcccgat
gagggtggccagcaggggcggcgcgggcggcaggagacggtgcgcattgccggcctggtc
gtgggggtgcgagtgcgcaacacgcagaacgggcgcatgggcatcgcgaccctggatgac
cgcagcgggcgtgccgagatcgtgctgttcaacgacgacttcaccacgtaccgcgatcgg
ctggagccggacaccctcctggtggccgagggcacggtggcgctggatgactatgccggc
ggtatccgcatgcgggcccgggcggtgtacacgctggacgaggctcgggcgcagtgggca
cgcgctctgcacctgtgtctggagggggtgcgtgccgagcaggtagagaacctgcgcggc
ctgatgcaagaacatcgcgatggccagtgccgagtccacctgtgctaccgccgggacggc
ctcgaggccgaactgagtctgcccgagggctgggccatccgtccggacgagcggttgctg
cgcaacctgcagcagaccctggggccgggttgcgaggcccaggtcctgtacggccggtga
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