Thioalkalivibrio sp. K90mix: TK90_1870
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Entry
TK90_1870 CDS
T01174
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
tkm
Thioalkalivibrio sp. K90mix
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_3
PAS_4
PAS_8
PAS_7
PAS_12
DUF1421
Motif
Other DBs
NCBI-ProteinID:
ADC72361
UniProt:
D3SBF6
LinkDB
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Position
complement(1986516..1989794)
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AA seq
1092 aa
AA seq
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MLGVLWIILSDVAVAWWLGTGIGDVLTLANLGKGLGFIIVSALALYLAMSWSAVGQLAGA
RASSLTSSTPRRFGPKRFGAGGWTVLALAVALSTTGMAFGTWQIQATSAKDQAREDLRRS
AFLKGGLLDRWLAEREGDAMVLAQARDFSVFARTAVLVQSPLALEQVRHRLELMHERYDY
DAISLIDRDWRPIVEVGHNSLDDVAVDKAVTEALVSGEVSAPYLHANARGEVRISWAVPV
ADRVDPDGEPVAVVVLSSGIEMLRALLTVGEEAGTVDPHVVARDDTRWATIARIEAQGGH
IIDPPEAFARLRHEILDREREGVSVALFDDADGGFLAGVQPLSAPGWDLILKRNVASLAI
APRQQALWMGAATLFVWLIMLAAGGLLWRQQWLRQHLVLMHSHAEQDRLLRLYFDMPFLG
MAISYPGGRGWERVNPFLAQMLGYSPEELVRTDWDRLAVPEDRSCEAPLDAAMQAGERDG
YSIEKRLLRRDGRVLVADIDVKCTRTADGAIDRVVATIEDITERREQEERRRLASVVFEN
TREGVVITDATAHILSVNRAFTELMGYTQDEVVGRTPKMFQSGRHDQAFYANMRRQLETE
GHWQGEIWNRRKTGEIFPELQSITAVRDDQGRLTHYVSVFADISRLKASEAELDFLAHHD
PLTELPNRRLLRARLAQAIALMRRRNGLLAILIIDVDRFKDINDSRGHAAGDRLLKIVAD
RLQAGQRGTDTVARLASDEFAVLADNLAHVDDAALVAEDILREVGRPVDLGDGVEFEIAA
TIGIAVFPDHGADAETLLQQAGTALSRAKEDGRGGYRYYSDAFTEAARERIDLNARLRRA
IEQDSLEVHYQPQYRVSDGVLIGAEALLRWTDPELGPVSPGRFIPVAEQTGLIVELGDWV
LRRVLAQGQAWRDAGYPAVRLAVNVSALQFQRVAIDHQVADLLEGHGYPAKYLELEITES
ALMSDPERARRILQRLRERGVSFAVDDFGTGYSSMAQLKRFPVDTLKVDKSFVDGLAAGA
HDADDRSIARAIVALGHGLGLSVLAEGVETREQLGALRELGCDHYQGYLASRPLPAEHFA
ALLAEGLVAEEY
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
gtgctgggcgtgctgtggatcatcctgtccgatgtcgctgttgcctggtggctgggcacc
ggcatcggcgatgtattaaccctggccaatctcggcaagggcctcggattcatcatcgtg
tcggctttggccctttatctggcgatgagttggagcgccgtcgggcaactggccggcgcc
cgcgcgtcatcgttgacgtcctctaccccgaggcgttttggcccaaagcgctttggagcg
ggtggctggacggtgctggcccttgcagtcgccctgtccacgaccggtatggcgtttggt
acctggcagatccaggcgacctccgcgaaggatcaggcgcgtgaggatctgcgccgatcg
gcctttctcaagggtggcctgctggaccgctggctggcggagcgcgagggtgatgcgatg
gtgctcgcccaggcgcgggacttctccgtctttgcgcgaaccgccgttctggtgcagtcg
ccgctggcgctggaacaggtacgtcatcgcctggagttgatgcatgagcgttacgactac
gacgccatttcgctgatcgaccgggactggcggcccatcgtggaggtggggcataactcg
ctggacgatgtcgcggtggacaaggcggtcacggaggccctggtcagcggtgaggtaagt
gccccctacctgcatgcgaatgcccggggcgaggtgcggattagctgggcggtcccggta
gcggaccgagtcgatccggacggcgagccggtcgccgtggtcgtgctgtcctccgggatc
gagatgttgcgtgcgctgctgaccgttggcgaggaggcggggacggtggatccccatgtg
gtggcccgggacgacacacgctgggccacgattgcacgaatcgaggcacagggcggccat
atcatcgacccgccggaggccttcgcgcgcttgcgccacgagattctcgaccgtgaacga
gagggtgttagcgtagcgctgttcgatgatgccgatggggggtttctggcgggcgtccag
ccgctgtcggcaccgggatgggacctgatcctcaagcgcaatgttgcgtccctggcgatc
gcaccccgccagcaggcgctatggatgggggccgccacgctgtttgtctggttgatcatg
ctggcggccggtggcctgctctggcgccagcagtggctgcgccaacatctggtactaatg
cattcgcatgccgagcaggaccgtctgctgcggctgtacttcgatatgccgtttctgggt
atggcgatctcgtatccgggcggcaggggctgggagcgggtcaatccgttcctggcacag
atgctcggctactcgccggaagaactggtccggaccgactgggatcgtctggccgtaccc
gaggatcgcagctgcgaagcgccgctcgatgcggccatgcaggccggcgagcgcgacggg
tacagcatcgagaagcggctactgagacgggatggccgggtgctcgtcgcggacatcgat
gtgaaatgcacgcgcacggccgatggcgccatcgatcgcgtagtcgcgaccattgaggac
atcaccgaacgccgggagcaggaggagcgccggcggctggcgtcggtggtgttcgagaac
acccgcgagggtgtggtgattaccgacgccaccgcccacatcctgtcggtcaatcgtgca
ttcaccgagttgatgggatatacccaggacgaggtcgtggggcgcacgcccaagatgttc
cagtcggggcgacacgaccaggccttctacgccaacatgcggcgtcaactcgagacggaa
gggcactggcagggcgagatctggaaccggcgcaagaccggcgagatttttcccgaactg
caaagcatcacggcagtgcgcgatgaccagggtcgcctgacccactatgtctccgtgttc
gcggatatctcccgtctcaaggcctcggaggccgagctcgactttctcgcgcaccatgac
cccctgaccgagctgcccaaccgccggttgctgcgggcccgactggcgcaggcgatcgcg
ctgatgcggcgacgtaatggtttactggcgatcctgatcatcgacgtcgaccgtttcaag
gacatcaacgactcgagagggcatgccgcgggtgatcgcctgctgaagatcgtcgccgat
cgcctccaggcggggcagcggggtaccgacacggtcgcccgcctggccagcgacgagttt
gccgtgctggcggacaatctggcgcatgtggacgatgccgcgctggtcgccgaggacatc
cttcgcgaagtgggacgcccggtcgatctcggcgacggcgtcgaatttgagattgcggcg
acgattggcatcgccgtgttcccggaccacggggcggatgccgagacgttgctgcagcag
gccggtaccgcgctgtcgcgtgccaaggaggacgggcgtggcggctatcgctactactcg
gatgcgttcaccgaggcggcccgcgaacgcatcgacctgaatgcgcggctgcggcgcgcg
atcgagcaggacagccttgaggttcactaccagccgcagtatcgcgtcagtgatggtgtg
ctgatcggggccgaggccctgctgcgctggaccgaccccgaactgggccccgtatcgccc
ggacgcttcatcccggtagcggagcagacgggcctgatcgtggagctgggtgactgggtg
ctgcggcgtgtgctggcgcaggggcaggcctggcgcgatgccggctatccggctgtacgc
ctggcggtgaatgtctccgcactccagtttcagcgggtggcgatcgaccatcaggtggcc
gatctgctggaggggcatggttatccggccaagtacctggaactggagattaccgagtcg
gcgctgatgtccgaccccgagcgcgcccggcgtatcctccagcgcctgcgcgagcggggc
gtgagcttcgcggtggacgatttcgggaccgggtattcgtccatggcccagctcaagcgc
ttcccggtcgatacgctgaaggtcgacaagagtttcgtggatggcctggcggcgggtgcg
cacgatgccgatgatcgctcgattgcgcgggcgatcgtggcgctggggcacgggctgggc
ctgagcgtgctggccgagggggtcgagacccgcgagcagctcggcgcgctgcgcgagctg
ggctgcgatcactaccagggttatctggccagccgcccgctacctgccgagcattttgcc
gcgctgctggccgaaggattggtggcggaagagtattag
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