Thioalkalivibrio sp. K90mix: TK90_1989
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Entry
TK90_1989 CDS
T01174
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
tkm
Thioalkalivibrio sp. K90mix
Brite
KEGG Orthology (KO) [BR:
tkm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tkm03019
]
TK90_1989
03009 Ribosome biogenesis [BR:
tkm03009
]
TK90_1989
Messenger RNA biogenesis [BR:
tkm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TK90_1989
Ribosome biogenesis [BR:
tkm03009
]
Prokaryotic type
rRNA processing factors
TK90_1989
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
ADC72480
LinkDB
All DBs
Position
complement(2114925..2116439)
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AA seq
504 aa
AA seq
DB search
MTGTEILMNVTPQESRVALVDNGVLTELHLERTRRRGIVGNIYKGRVVRVLPGMDAAFVD
IGLDRTAFLHASDVAPVEREELDGHGSANGPGNGGGNGSGRAETIRELLREGQDVLVQVI
KDPLGTKGARLTTYITVPSRHLVLMPNQSNVGVSTRIEDEGSRSRLREKVEALRNEIAPQ
HGFIVRTAAELVDDEALENDTAFLKKVWDSIQMAAAEASAGEEVYADLPLVLRILRDMVG
VEIERIRIDSRETYQKVCEFVAQYLPELVGRIEHYPGERPIFDLFNVEEEIQRALERKVE
LKSGGYLIFDQTEAMTTVDINTGGFVGHRKLEETIFKTNLEAAQAIGRQLRLRNLGGIII
IDFIDMQDDEHKRQVIRALEKALERDHVKTQICDVSPLGLVEMTRKRTRESLEHQLCEPC
PTCAGRGYLKSAETVCYELFREILREVRQYDARELRVLASQNVIDLLLDEESASLAELQS
FVGIPIRFQVETLYTQEQFDVVFV
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaccggtaccgaaatcctgatgaacgtcaccccccaggaaagccgcgtggccctggtc
gacaacggcgttctgaccgaactgcacctggaacgaacccgtcggcgcgggatcgtcggc
aatatctacaagggccgtgtcgtacgcgtgctcccgggcatggacgcggccttcgtggac
atcggcctggatcgtacggcctttctgcatgcctccgacgtggcaccggtggagcgcgaa
gaacttgacggccatgggtcggccaacggtccgggtaacggcggcggcaatggttccggc
cgtgccgagaccatccgcgagctgctacgcgaaggccaggatgtgctggtgcaggtaatc
aaggacccactgggcaccaagggcgcccggctgacgacctacatcaccgtgccgtcgcgc
catctggtgctgatgcccaatcagagcaatgtcggtgtgtccacgcgcatcgaggacgag
ggttcgcgcagtcgtctgcgcgagaaggtggaggccctgcgcaacgagatcgccccgcag
catggcttcattgtgcgcaccgcggcggaactggtggacgacgaggccctggaaaacgac
acggccttccttaaaaaggtctgggacagtatccagatggcggctgccgaggccagcgcg
ggggaggaggtctacgccgacctgccgctggtgctgcgcatcctgcgcgacatggtcggg
gtcgagatcgagcgcattcgaatcgattcgcgcgagacctaccagaaggtgtgcgagttc
gtcgcacagtacctcccggaactggtggggcggatcgagcattaccccggcgagcgcccg
atcttcgatctgttcaatgtcgaggaggagattcagcgagcgctggaacgcaaggtcgag
ctgaagtccgggggctacctgattttcgaccagaccgaggcgatgaccacggtggatatc
aacactggcggcttcgttgggcatcgcaagctggaagagacgatcttcaagaccaacctc
gaggcggcccaggcgatcgggcgccagctgcgcctgcgcaatctcggcgggatcatcatc
atcgatttcatcgacatgcaggacgacgagcacaaacgccaggtcatccgtgccctggag
aaggcgctcgagcgcgatcacgtgaagacacagatctgcgatgtctcgccgctggggctg
gtcgagatgacgcgcaagcgcacacgcgagagcctggaacaccagctctgcgagccgtgt
ccaacctgtgcggggcgcggctatctgaagtcggccgagaccgtttgctacgagctgttt
cgcgagatcctgcgcgaagtacgacagtacgacgcgcgcgaactgcgtgtgctcgcctcg
cagaacgtgatcgacctgctgctggatgaggaatcggccagcctggcggagctgcagagc
tttgtcggtatcccgatccgtttccaggtggagacgctatatacccaggagcaattcgac
gtagtgttcgtctag
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