Thioalkalivibrio sp. K90mix: TK90_2001
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Entry
TK90_2001 CDS
T01174
Name
(GenBank) (p)ppGpp synthetase I, SpoT/RelA
KO
K01139
GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:
2.7.6.5
3.1.7.2
]
Organism
tkm
Thioalkalivibrio sp. K90mix
Pathway
tkm00230
Purine metabolism
tkm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tkm00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
TK90_2001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tkm03009
]
TK90_2001
Enzymes [BR:
tkm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.6 Diphosphotransferases
2.7.6.5 GTP diphosphokinase
TK90_2001
3. Hydrolases
3.1 Acting on ester bonds
3.1.7 Diphosphoric-monoester hydrolases
3.1.7.2 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
TK90_2001
Ribosome biogenesis [BR:
tkm03009
]
Prokaryotic type
Other maturation factors
TK90_2001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD_4
RelA_SpoT
TGS
ACT_4
RelA_AH_RIS
HD
ACT_AHAS_ss
ACT
Motif
Other DBs
NCBI-ProteinID:
ADC72492
UniProt:
D3SBZ2
LinkDB
All DBs
Position
complement(2125652..2127823)
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AA seq
723 aa
AA seq
DB search
MAAGQPAVPGAASPVPGDSTRFLISDLCSELESYLEPDEVEEVYRAYLLGAEAHEGQTRK
TGEPYIYHPLAVARTMAEMRMDHKAICAAILHDVMEDTATSKDRIHAEFGEEVAELVDGV
SKLTHLQFQSKAEAQAENFRKMMLAITRDIRVILIKLADRLHNMRTLGVMRPDKRRRIAK
ETLEIYAPIAQRLGMNAIRRELEQLGFSAKHPWRAAVLERAVQRAGGNRREPMKNIEQAI
CSRMEAAGIVGRISGREKSLYSIYRKMRDKHHSFEEVFDVFAIRIIVDDVDTCYRSLGVV
HNLYKPVPGRFKDYIAIPKSNGYQSLHTILFGPQAIPIEVQIRSTEMDRVAESGIAAHWQ
YKAGGESARTAQSRAREWLKDVLEIQNSVGNSIEFLENVKVDLFPDEVYTFTPEGDILVL
PRDATPIDFAYAVHSDVGNRCVAAKIDRQLAPLSVRLQSGQTVEIVTAPGARPNPAWLSF
VVTGKARSGIRHCLKSMQSDEARALGERLLEKALSALDTSLKQISPARLDQLLDAMQLQD
LDSLLVDIGLGNRMASLVARQMVGKESAEADNTTQTTLAVKGTEGLVLNYARCCHPIPGD
PIIGQLSAGRGLVVHRESCRNVLHESRDRADKTIALEWSHEPELQFTAAVRTRTANRRGA
LADMAAVIADNGSNIEHISFNEQDGHSTAMTFLLTVSDRQHLAQIMRGLRRLPDVLRIAR
QRG
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgggcagccagccgtgcccggggccgcatcgccggttcccggtgactcgacc
cgattcctgatcagcgatctatgttccgagctcgagtcttacctcgagccggacgaagtc
gaggaggtctatcgcgcctatctgctgggcgcggaggcccacgaaggtcagacccgcaag
accggcgagccgtacatctaccaccccctggccgtggcccggaccatggccgagatgcgg
atggaccacaaggccatctgtgccgcgatcctccatgacgtcatggaggataccgccacc
agcaaggatcgcatccacgccgagttcggcgaggaagtggccgagctggtcgatggcgtc
tccaagctcacccacctgcagttccagtccaaggccgaggcgcaggcggagaatttccgc
aagatgatgctggcgatcacccgcgatatccgggtgatcctgatcaagctggccgaccgc
ctgcacaacatgcgcaccctgggcgtgatgcgcccggacaagcgccgccgcatcgccaag
gaaaccctggagatctacgcgccgattgcccagcgcctggggatgaacgcgatccgccgc
gagctggagcagctcggcttttccgccaagcacccctggcgggccgcggtcctggaacgc
gccgtgcagcgggccgggggcaaccggcgcgaaccgatgaagaacatcgaacaggcgatc
tgctcgcgcatggaggcggccgggatcgtcgggcgaatctccgggcgcgaaaagagcctg
tacagcatctatcgcaagatgcgcgacaagcaccactcgttcgaggaggtgttcgacgtc
ttcgcgatccgcatcatcgtcgacgatgtcgacacctgctatcgctcgctgggtgtggtg
cacaacctctacaagccggtgccggggcgcttcaaggactacatcgcgatccccaagtcg
aacggctaccagtcgctgcataccatcctgttcggcccgcaggccatcccgatcgaggtg
cagatccgctccaccgagatggatcgcgtggccgagagcgggatcgccgcgcactggcag
tacaaggccgggggcgagtccgcgcgcaccgcgcagagccgggcccgcgagtggctgaag
gatgtactggagatccagaacagcgtcggcaactccatcgagttcctggaaaacgtaaag
gtcgatctgttcccggacgaggtctacaccttcacccccgagggcgacatcctggttcta
ccgcgcgatgcgacaccgatcgattttgcctacgcggtgcactccgacgtcggcaaccgc
tgcgtggcggcgaagatcgatcgccagctggcaccgctttcggtgcgcctgcaaagcgga
cagacggtggagatcgtcaccgcccccggcgcgcgccccaacccggcctggctgtccttc
gttgtcactggcaaggcccggtccggcatccggcattgcctgaagtcgatgcagtcggac
gaggcccgtgcccttggcgaacgcctgctggagaaggccctgagcgcactggacacctcc
ctcaagcagatctcgccggcgcgcctggatcagctgctcgacgcgatgcagctacaggac
ctggacagcctgctggtggatatcgggctgggcaaccgcatggcctcgctggtcgcacgc
cagatggtgggcaaggagagcgcggaggccgacaacactacccagaccacgctggcggtc
aagggtaccgagggtctggtgctgaactatgcccgctgttgccacccgatccccggcgac
ccgattatcggccagctgagcgcgggtcgtggccttgtggtgcaccgggagagctgtcgt
aacgtgctgcacgagagccgcgaccgggcggacaagacaatcgcgctcgaatggtcacac
gagccggaactgcagttcaccgcggcggtgcgcacccgcaccgccaaccggcgcggtgcg
ctggccgacatggcggccgtgatcgccgacaacggctcgaatatcgagcacatctcgttc
aacgaacaggacgggcactccaccgcgatgaccttcctgctgacggtcagcgatcgccag
cacctggcccagatcatgcgaggcctgcggcgcctgccggatgtgctgcgtatcgcgcgc
cagcgcggttag
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