Thioalkalivibrio sp. K90mix: TK90_2017
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Entry
TK90_2017 CDS
T01174
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
tkm
Thioalkalivibrio sp. K90mix
Pathway
tkm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tkm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TK90_2017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tkm03400
]
TK90_2017
Enzymes [BR:
tkm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
TK90_2017
DNA repair and recombination proteins [BR:
tkm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TK90_2017
RecFOR pathway proteins
TK90_2017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF3882
Motif
Other DBs
NCBI-ProteinID:
ADC72508
UniProt:
D3SC08
LinkDB
All DBs
Position
complement(2139911..2140426)
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AA seq
171 aa
AA seq
DB search
MRILGIDPGSRITGFAVIEYAKGQGRSRGHGVIRPRSKGFPERLGEIFAGVVEVIGELKP
DVLAIETVFVARNAQSAIKLGHARGAAICAATQAGLPVHEYAPRAIKMAVVGVGSADKEQ
VQHMMQQLLRLTEPASSDAADALAVALCHAHTAQHQARLAGAASAVIGGRP
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatccttggtatcgaccccggatcgcggatcactggctttgcggtgatcgagtac
gccaagggccagggccgttcccgcggccatggcgtgatccggcccagatccaaggggttt
cccgaacgactgggcgagatcttcgccggcgtggtcgaggtgatcggcgaactcaagccc
gacgtgctggcgatcgaaacggtgttcgtcgcgcgcaatgcgcagtcggcgatcaagctg
gggcacgcccggggggccgccatctgcgcggcgactcaggccgggctcccggtacatgaa
tatgccccgcgtgcgatcaagatggccgtggtcggcgtgggcagcgcggacaaggagcag
gtccagcacatgatgcagcaattgttacgtctgaccgaaccggccagcagcgatgccgcc
gatgccctggccgtcgcgctgtgccatgcccataccgcccagcaccaggcgcgtctggca
ggcgccgcctcggccgtgattggggggcgcccgtga
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