KEGG   Thioalkalivibrio sp. K90mix: TK90_2116
Entry
TK90_2116         CDS       T01174                                 
Name
(GenBank) DNA polymerase III chi subunit HolC
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
tkm  Thioalkalivibrio sp. K90mix
Pathway
tkm03030  DNA replication
tkm03430  Mismatch repair
tkm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tkm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TK90_2116
   03430 Mismatch repair
    TK90_2116
   03440 Homologous recombination
    TK90_2116
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tkm03032]
    TK90_2116
   03400 DNA repair and recombination proteins [BR:tkm03400]
    TK90_2116
Enzymes [BR:tkm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     TK90_2116
DNA replication proteins [BR:tkm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     TK90_2116
DNA repair and recombination proteins [BR:tkm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     TK90_2116
SSDB
Motif
Pfam: DNA_pol3_chi
Other DBs
NCBI-ProteinID: ADC72606
LinkDB
Position
2233876..2234295
AA seq 139 aa
MTHVSFYLLQDPAPEARLRFTCRLAKKASGQGHRVHIHTGSPELTRTLDEWLWTFEDTTF
LPHSTDVRNTDVPVSLHEAHAPSDRCDVLINLAADVPEYCGRFERVADIVGGEESEREAG
RARYRYFKERGYPLKHHNI
NT seq 420 nt   +upstreamnt  +downstreamnt
atgacccacgtcagcttctacctgctgcaggacccggccccggaggcgcggctgcgcttc
acctgccgcctggcgaaaaaggccagcggccaggggcatcgcgtgcacatccacaccggc
tcgccggagctgacccgcaccctggacgagtggctgtggaccttcgaggacactaccttc
ctgccgcacagcaccgacgtgcgcaacaccgacgtgccggtctccctgcacgaggcccat
gccccttcggatcgctgcgacgtgctgatcaatctggcggccgacgtgccggaatactgc
ggccgcttcgagcgcgtcgccgacatcgtcggcggcgaggagtcggagcgcgaggccggc
cgcgcccgctaccgctacttcaaggaacgcggctacccactgaagcaccacaacatctga

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