Thioalkalivibrio sp. K90mix: TK90_2124
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Entry
TK90_2124 CDS
T01174
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
tkm
Thioalkalivibrio sp. K90mix
Pathway
tkm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tkm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TK90_2124
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
tkm02022
]
TK90_2124
02035 Bacterial motility proteins [BR:
tkm02035
]
TK90_2124
Two-component system [BR:
tkm02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
TK90_2124
Bacterial motility proteins [BR:
tkm02035
]
Pilus system
Twitching motility proteins
TK90_2124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
HTH_28
AAA_16
HTH_23
HTH_50
Pre_tape_measure
AAA_19
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ADC72614
LinkDB
All DBs
Position
2244135..2245559
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AA seq
474 aa
AA seq
DB search
MSIRHVLVVDDEPDICELLEITLSRMGIEATTTEHLNGARELLAARDFDLCLTDMRLPDG
DGLDLVRHIQGQRPDLPVAVITAHGSVDTAVQALKLGAFDFVSKPVDLQQLRELIDTALR
MEPAPDLPGALNTDTVPDAETTRIDSPLLGQAPPMQTLRATIQKLARSQAPVFIRGESGS
GKELVAREIHRLGPRSDRPFVPVNCAAIPGELMESEFFGHRKGAFTGATQDHTGLFQAAS
GGTLFLDEVADLPLPMQVKLLRAIQERAIKPVGGTREIPVDVRLLSATHHDLERAVAEGR
FRQDLYYRLNVIELKVPALRERREDIPVLAQCVLARISEQWGTEPLELAPDALEVLARHP
FPGNVRELENILERAATLSEGPTIHADSIDLPRSAHGEPLPSAEAPGFVPPPPRREIPTA
TADDVALDQRLAEQERQAIATALQQTGGNRTAAARLLGLSFRQLRYRLKKLGIE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagcattcgccacgtcctggtcgtggacgacgaaccggacatctgcgaactcctcgag
atcaccctctcccgcatggggatcgaggccaccacgacggaacacctgaacggggcgcgc
gaactgctcgccgcgcgggactttgacctctgtctgaccgacatgcgcctgcccgatggc
gacgggctggacctcgtgcgccacatccagggtcagcgcccggaccttccggtggccgtg
atcacggcccacgggagtgtggacaccgctgtccaggccctcaagctgggcgcattcgac
tttgtcagcaagccggtggacctgcagcagctgcgcgagctgattgacaccgcactgcga
atggaacccgcccccgacctgcccggcgcgctgaataccgacacggtcccggacgccgaa
accacccgcatcgacagccccctgctcggtcaggccccgccgatgcagaccctgcgagcg
acgatccagaagctggcgcgcagccaggcaccggtgttcatccgtggcgaatccggctcc
ggcaaggagctggtggcacgcgagatccatcgcctggggccgcgcagtgatcgcccattt
gtgccggtcaattgcgcggcaatccccggcgagttgatggagagcgagttcttcggccac
cgcaagggggccttcaccggggccacgcaggatcacaccgggctgttccaggccgccagc
ggcggcacgctgtttctcgacgaggtcgccgacctgccgctgcccatgcaggtcaagctg
ctgcgcgcgatccaggaacgcgcgatcaagccggtcgggggcacgcgcgagatcccggtg
gacgtgcgccttttgtcggccacccaccacgacctggagcgcgcggtggccgaggggcgc
ttccgccaggacctctactaccgcctgaacgtgatcgaactgaaggtccctgcgctacgt
gaacgacgcgaggacatcccggtgctggcccagtgcgtgctggcacggatcagcgagcag
tggggtaccgaaccgctggaactggcgccggacgcactcgaggttctcgcccggcatccc
ttcccggggaacgtgcgcgaactggagaacatcctcgaacgcgcggccaccctcagcgag
ggccccacgatacacgccgacagcattgacctgccccgttccgcacatggcgaacccttg
ccatcggccgaggccccgggctttgtaccacccccgccccggcgcgagataccgacggcc
acggcggacgacgtcgccctggaccagcgcctggccgagcaggaacgccaggccatcgcc
acggcgctgcagcagaccggcggcaaccgcacggcggcggcgcgcctgcttgggctcagc
tttcgccagctgcgctatcggctcaagaagctcgggatcgagtaa
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