Thioalkalivibrio sp. K90mix: TK90_2768
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Entry
TK90_2768 CDS
T01174
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
tkm
Thioalkalivibrio sp. K90mix
Brite
KEGG Orthology (KO) [BR:
tkm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tkm03032
]
TK90_2768
03400 DNA repair and recombination proteins [BR:
tkm03400
]
TK90_2768
Enzymes [BR:
tkm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
TK90_2768
DNA replication proteins [BR:
tkm03032
]
Prokaryotic type
DNA Topoisomerases
TK90_2768
DNA repair and recombination proteins [BR:
tkm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TK90_2768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
TOPRIM_C
Exotox-A_target
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ADC73253
UniProt:
D3SGL2
LinkDB
All DBs
Position
pTK9001:120723..122675
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AA seq
650 aa
AA seq
DB search
MSAIPEAARQYTSESIQVLEGLEPVRKRPGMYIGGTDSSGLRHLLNEILDNAVDEAIAGH
GDEIEVVFHQDGSYSVNDNGRGIPIDMHREKGMHAAALLVTTLHAGGKFDNAAYKVSGGL
HGVGAAVTNAMSTRFDMDIRRDGQRYQQTFTEGGAPSDPEIKRYTGSYTGTLIRFWPDLA
RFDEDAEIDFDFMADRMKRTAYLVPGLQLSIREEVASEGGDEPRQAVFRFESFSQIIEDL
SVDSGDAISEIIEADSAEHIDGQGEIEVAVALRWHERNRTVLAGYANIIPTADGTHMTGL
RKAVTQAVNNYAEANNLLRGNQELKGDDIQAGLIAAVAVRLADPLFQGQTKEKLKNGPVT
GVVSRAIRAALDHAFEENPKMARAIVEKAKLAQKAREAADKAAEMVVNRKSVISATALPG
KLADCQEQDPSKSELFIVEGDSAGGSAKSGREREYQAILPLKGKILNTYRADPAKVLKSD
EVKNLMLALGCGPKSHFDLEKLRYHRIVILADADSDGHHIATLVLTYFHTNAPELIESGY
VYIALPPLYRVRKGKQSAYLKDDRELEAFMAQQKNPDKWQVQRFKGLGEMNAEQLWEAAM
DPETRRIARVQYSEQGREGDNEVFEVLMGAEVPPRRAFIEEYAEKAVIDV
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctatccccgaagccgcccgccagtacaccagtgaatcgatacaggtcctcgaa
ggccttgaaccggtgcgcaaacgacccggtatgtacatcgggggcaccgactcatccggc
ctgcgccacctcctcaatgaaatcctcgataacgccgtggatgaagccatcgccgggcat
ggggatgagatcgaggtcgtatttcatcaggacggctcttattcggtgaacgacaacggg
cgcggcatcccgatcgacatgcatcgagagaaggggatgcatgcggcggccctgctggtc
accacactccatgccggtggcaagttcgataacgcagcttacaaagtgtccggggggctc
cacggcgtaggggccgcagtcaccaacgccatgtccactcgcttcgatatggacatccgg
cgcgacggccagcggtatcagcagaccttcaccgaaggcggcgctccgagtgatcccgag
atcaaacggtacaccgggtcctacaccgggacgctgatccgcttctggcccgatcttgcg
cgctttgacgaagatgcggagatcgacttcgacttcatggccgaccgcatgaagcggacg
gcgtacctggtccccgggctgcaattatcgattcgcgaagaggtggcatcggaggggggc
gacgagccccgtcaggccgtgttccggtttgagtcgttctcgcagatcatcgaggacctg
tcggttgatagcggggacgccatctcggaaatcatcgaggccgacagcgcggaacatatc
gacggccaaggtgaaatcgaggtcgcggtggcgctacggtggcacgaacgaaaccggacc
gtgctggcgggatacgcgaacatcatcccgaccgcggacggcacccacatgaccggcctg
cgcaaggccgtaacccaagcggtcaacaactacgcagaagccaacaacctgctgcgcggc
aatcaggaactcaaaggcgacgacatccaggccggcctgatcgccgcggtcgcagtacgg
ctggcggaccccttgttccagggtcagacgaaggaaaagctgaaaaatgggcccgtgacc
ggcgttgtgtcgcgcgccatccgcgcagccctcgatcatgccttcgaggaaaacccgaag
atggcgcgcgccatcgtcgaaaaagccaagctcgcacagaaagcgcgcgaagcggccgat
aaagcggccgaaatggtcgtcaaccgaaagtcggtgatctccgcgaccgccctgcccggc
aagctggcggactgccaggagcaggatccttccaagtcggagctgttcatcgtggaaggt
gattcggcgggcggttcggcgaagtcaggtcgtgagcgcgagtaccaggccattttgccg
ctcaagggcaagatcctgaatacctaccgcgcggacccggcgaaggtactgaagtccgat
gaagtgaagaacctgatgcttgcgctggggtgtgggccgaaatcgcacttcgatctcgag
aaactgcgctaccacaggatcgtgatcctcgcggacgcggactccgacgggcaccacatc
gccacgctggtcctgacctacttccataccaacgcccctgaactgatcgagagcggctat
gtctacatcgcgctcccgcccttgtatcgggtgcgaaaaggcaagcagtcagcctacctg
aaggacgaccgggaactggaggcctttatggcccagcagaagaacccggacaaatggcag
gtccagcggttcaagggactcggggaaatgaatgccgagcagctctgggaagcggcgatg
gacccggaaacccggcgcatcgctcgggtccagtattccgagcagggacgcgagggggac
aacgaggtattcgaggtcctgatgggggcggaggtgccgccacggcgcgcattcatcgag
gagtacgccgaaaaggcggtcatcgatgtctga
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