Thermococcus kodakarensis: TK0060
Help
Entry
TK0060 CDS
T00226
Name
(GenBank) hypothetical protein, conserved, DUF127 family
KO
K07254
tRNA (cytidine56-2'-O)-methyltransferase [EC:
2.1.1.206
]
Organism
tko
Thermococcus kodakarensis
Brite
KEGG Orthology (KO) [BR:
tko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tko03016
]
TK0060
Enzymes [BR:
tko01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.206 tRNA (cytidine56-2'-O)-methyltransferase
TK0060
Transfer RNA biogenesis [BR:
tko03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
TK0060
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Trm56
SpoU_methylase
SPOUT_MTase_2
SLIDE
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
BAD84249
UniProt:
Q5JEG5
LinkDB
All DBs
Position
complement(52064..52606)
Genome browser
AA seq
180 aa
AA seq
DB search
MRKMIAVLRLGHRPERDKRITTHVALTARAFGADKIIIAAEEDEHVKESVEDVVNRWGGP
FEIEFNPSWKKILREWKDRGIIVHLTMYGIHIDDAIPRIKDELKSGKDLLIVVGAEKVPR
EVYEMADYNVAVGNQPHSEVAALAVFLDRLLDGAGLRKEFHNAKLKIVPQERGKKVLQLE
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
gtgaggaagatgatcgcagtcctcagacttggacaccggcctgagagggacaagaggata
acgacacacgtagcactgacggcaagggcctttggagccgataaaataataatagccgca
gaagaggacgagcatgtcaaagagagcgtggaagacgttgtgaaccgctggggcggtcct
tttgaaattgaattcaaccccagctggaagaaaatcctgagagagtggaaagatagggga
atcatagttcacctcactatgtacggaatacacattgatgacgcaattccccgcataaag
gatgagctgaaatctggaaaagacctccttatcgtcgtcggtgcagaaaaggtgccgaga
gaggtctatgagatggcggactacaacgtggccgtcggcaaccagccccacagcgaggtt
gcagctctggctgtctttctagacaggttgctcgacggtgccggccttaggaaggaattc
cataatgcgaagctcaagatagtcccccaggagcgaggtaagaaggtccttcagctcgaa
tga
DBGET
integrated database retrieval system
