Thermococcus kodakarensis: TK0132
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Entry
TK0132 CDS
T00226
Name
(GenBank) transcription initiation factor TFIID
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
tko
Thermococcus kodakarensis
Pathway
tko03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tko00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TK0132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tko03000
]
TK0132
03021 Transcription machinery [BR:
tko03021
]
TK0132
Transcription factors [BR:
tko03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
TK0132
Transcription machinery [BR:
tko03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
TK0132
RNA polymerase III system
TFIIIB
TK0132
RNA polymerase I system
SL1/TIF-1B
TK0132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-ProteinID:
BAD84321
UniProt:
Q52366
LinkDB
All DBs
Position
106208..106780
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AA seq
190 aa
AA seq
DB search
MVDMSNVKLRIENIVASVDLFTDLNLEKVIEICPSSKYNPEEFPGIICRFDDPKVALLIF
SSGKLVVTGAKSVDDIKRAVYKLIEMLKKIGAKFTREPQIDIQNMVFSGDIGMEFNLDAV
ALILPNCEYEPEQFPGVIYRVKEPRAVILLFSSGKIVCSGAKSEQDAWEAVKKLLRELEK
YGLIEEEEEW
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
ttggtggacatgagcaatgtaaagctcaggattgaaaatatagtcgcttctgtggatctc
tttacagacctcaaccttgagaaggtcatagagatctgcccgagctccaagtacaatccg
gaggagttcccgggtataatctgccgctttgacgacccgaaagtggcccttctgatattc
agctcgggaaagctcgttgtaactggcgcaaagagtgttgacgacatcaagagagccgtg
tataagctcatagagatgctgaagaaaatcggtgccaaattcaccagggagccccagata
gacatccagaacatggtattcagcggtgacatcggtatggagttcaacctcgatgccgtt
gctctgatcctgccgaactgtgaatacgagcccgagcagttcccgggcgtcatataccgc
gtcaaggagcctagggctgttatactgctcttctcctctggaaagatcgtctgttctggc
gccaagagcgagcaggacgcctgggaggccgtcaagaagctcctccgcgagctggagaag
tacggcctcatcgaggaagaggaagaatggtga
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