Thermococcus kodakarensis: TK0184
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Entry
TK0184 CDS
T00226
Name
(GenBank) snoRNP component, Nop56p/58p homolog
KO
K14564
nucleolar protein 56
Organism
tko
Thermococcus kodakarensis
Pathway
tko03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tko00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TK0184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tko03009
]
TK0184
Ribosome biogenesis [BR:
tko03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
TK0184
Prokaryotic type
TK0184
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Nop5_56-rel_N_Arc
Motif
Other DBs
NCBI-ProteinID:
BAD84373
UniProt:
Q5JFN0
LinkDB
All DBs
Position
complement(153491..154753)
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AA seq
420 aa
AA seq
DB search
MKAYIAENVRGIYAFDESGKLIGSKPFSGKPEVSLDKLLKGEPSDELIEFLDELGSEGYT
EFVVEDSELSRNLKELGYNATAEFPNIAGEKLRSSPEEFLGENWFDEYFSVGVALTRLRI
QEQSGARDKMIIQAIEALDDIDKVINLLVSRLREWYGLHFPELDELLPKHPQYVAFVKEI
GPRENATREKLEKLGFSEGKIEKILEAAEKSMGAPLGKFDSAIIQKLASEIHDLYKLREQ
IEDYLETAMDEVAPNLKALVGAKLAARLMSLAGGLKELAMMPASTIQVLGAEKALFRHLR
TGAKPPKHGVIFQYPAINRSPWWQRGKIARALAGKLAIAARVDYFSGEYIGEELKKELEQ
RIQEIKEKYPNPPKRKAKPEKKKKEKKKFKGKGKGKHEKGKGFGGKKDKKKKKKGKGGKR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcttacatagccgagaacgtcaggggcatctacgcctttgacgagagcgggaag
ctcatagggagcaaacccttcagcgggaagccggaggtaagccttgacaagctcctcaag
ggcgagccgagcgacgagctcatagagtttctcgacgagcttggaagcgaaggctacacc
gagttcgtggtcgaggactccgagctgagcagaaacctcaaggagctcggctacaacgcc
acagccgagttcccgaacatagctggcgaaaagctccgctcaagccccgaggagttcctg
ggcgagaactggttcgacgagtacttcagcgttggtgttgccctgaccaggctccgcata
caggagcagagcggcgctcgcgataagatgatcatccaggccatcgaggccctcgacgac
attgacaaggtcataaacctcctcgtttctcgtcttagggagtggtacggtctccacttc
ccggagctcgatgaactcctcccgaagcaccctcagtacgttgcgttcgttaaggagatc
ggcccgagggagaacgcgaccagggagaagcttgagaagctcggcttctccgagggcaag
atagagaaaatccttgaagcggccgagaagtcaatgggcgccccgctcggcaagttcgac
agcgccataatccagaagttggccagcgagatacacgacctctacaagctgagggagcag
atagaggactaccttgagactgccatggacgaagttgctccgaacctcaaggcgctcgtc
ggggcgaagcttgctgccagactcatgagcctcgcaggtggattgaaagagctcgccatg
atgccggcatcgaccatacaggttctcggagccgaaaaagccctcttcaggcacctcagg
acgggtgcaaagccgcccaagcacggtgtcatcttccagtatccggctataaaccgctca
ccctggtggcagaggggtaagatagcccgcgctctggcaggaaagctcgcgatagcggca
agggtggactacttctccggcgaatacataggtgaggagctgaagaaggagcttgagcag
aggattcaggagatcaaggagaagtacccgaacccgccgaagaggaaggccaagcccgag
aagaaaaagaaggaaaagaagaagttcaagggcaaaggaaaaggaaagcacgagaagggc
aagggcttcggcggaaagaaggacaaaaagaaaaagaagaagggtaagggcggtaagagg
tga
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