KEGG   Thermococcus kodakarensis: TK0447
Entry
TK0447            CDS       T00226                                 
Name
(GenBank) hypothetical protein, conserved, RAMP superfamily
  KO
K19091  CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
Organism
tko  Thermococcus kodakarensis
Brite
KEGG Orthology (KO) [BR:tko00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tko02048]
    TK0447
Prokaryotic defense system [BR:tko02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-A factors
    TK0447
   Subtype I-D factors
    TK0447
SSDB
Motif
Pfam: Cas_Cas6_C Cas6_I-A
Other DBs
NCBI-ProteinID: BAD84636
UniProt: Q5JD42
LinkDB
Position
complement(375541..376314)
AA seq 257 aa
MRIKLLLRFKPPFLIPYNYPRYLYSFLLRAIELADKEVAGRIHNNKRDIKFVASKFMPIG
STKRLEQGLLVESGTVELYVGSTEDIILESLVRGLGQGVGMLHVRGQRLLSYEAELEEIP
KHLSGKRFKTLSPVSVYHNNPPNGFRQWDLSPVGPPNSPFENEPKVWKELLFENLKSKYM
MVYGEPYEGSFDIRVLTKKPKSRRLLVKIDERTGKPIYARVWEFDFKMWGEEELLRVAYE
LGIGMRNPHGFGMVEVI
NT seq 774 nt   +upstreamnt  +downstreamnt
atgaggattaaactgctcctccgcttcaagcctccctttcttatcccctacaactacccg
cgctacctctactccttcctcctccgtgccattgagctcgccgataaggaagtcgcgggc
aggattcacaacaacaagagagacatcaagttcgtggcctctaagttcatgcctattggg
agcacaaaaaggcttgaacagggccttcttgtcgagtcaggaaccgtggagctttacgtg
ggttccacggaggacatcatccttgaatctcttgttagaggcctcgggcagggagtagga
atgctccacgtaaggggtcagagactcctgagctacgaggccgagctcgaagagatccct
aaacacctctctggaaagcgctttaaaaccctctcgcccgtcagtgtttaccacaacaat
cctccaaatggatttcggcagtgggatctttctccagttggtccgccaaacagccccttt
gagaacgagcctaaggtttggaaggagcttctctttgaaaaccttaagtcaaagtacatg
atggtttacggcgagccttatgaggggagctttgacattagagtcctcacaaagaagccg
aagagccgcaggcttctcgtcaagatagatgagagaacaggaaagccaatctacgcccgc
gtctgggagtttgatttcaagatgtggggcgaggaagagctccttcgggttgcgtatgag
cttggaatcggaatgaggaaccctcacgggtttggtatggttgaggtgatttaa

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