KEGG   Thermococcus kodakarensis: TK0450
Entry
TK0450            CDS       T00226                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
tko  Thermococcus kodakarensis
Brite
KEGG Orthology (KO) [BR:tko00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tko02048]
    TK0450
Enzymes [BR:tko01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     TK0450
Prokaryotic defense system [BR:tko02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    TK0450
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD Helicase_C ResIII AAA_22 PhoH DUF7822
Other DBs
NCBI-ProteinID: BAD84639
UniProt: Q5JD39
LinkDB
Position
complement(377612..379213)
AA seq 533 aa
MAGTPGGASLRAFKKALQKLAEAKGFKPEKRPLLEEAFHFITPSENPPFLILQAPTGYGK
TLLSFALAVHSLWDASIFDRVIHVLPMRSIIEDIQKTAEDAFGFSRTKMMGSSGEFLHLF
PLNITTADTFTWDLLKLNTKKRHRIKAGLEFGYDYLTQASILTSLVIFDEAHFLLEDESM
VTAFLSAIEFLTSQKVPIVVMTATLSEAHRGIFEKYAKKNGYNFYVLCPQEDDPFIEREL
KKEVEIEFREGNPLDFIEPGRRNAIIVNSVKRAVDLFNEAKNNPEIWPESERIMLIHGRM
TPSHKRELIKRLREWTKKENFLLIGTQAVEAGVDFSVDLMITDRAPINSLLQRFGRVARY
GSDMKANIFVLEDAPCGPYPKDKVEKTVNLMKEHQILPRVPDTYQAIVTEVHGKKPISVK
KNVNRELKRTLLKLMSDPTKRAPHVLSSIERLTASGTPIMRGFLIPLSVGGEAVLISPSK
LVELYYRGVVEIRGWKGNIRSLNDAYNVAKSVALGKNVEVVFIGEYDWERGIP
NT seq 1602 nt   +upstreamnt  +downstreamnt
gtggcaggaacacctggaggtgcttctttgagggcattcaagaaggcactccagaagctc
gcggaggcaaaggggtttaagccagaaaaaaggcccctactagaggaggcttttcatttt
atcaccccctccgagaatccgccttttttaatcctccaggcaccaacaggctacggaaaa
actctcctaagctttgccctggctgttcactccctttgggatgcctccatctttgacagg
gtgattcatgttctcccgatgcgttcaatcatagaggacatccagaaaacagcggaggat
gcattcggattctccagaaccaagatgatgggttcgagcggtgaattccttcacctcttt
ccgctcaacataaccaccgcggacacattcacgtgggatttgctaaagctcaacacaaag
aagaggcacaggattaaagctggcttagagttcggctacgattacttgacccaggcctca
atactgacctcgctggtaatctttgatgaggcccacttccttcttgaggatgaatcaatg
gtgaccgcatttctatcagctattgagttcctcacatcccagaaagttcccatcgtggtt
atgacagccaccttatcggaagcccacagaggaatcttcgagaaatatgcaaagaaaaac
ggctataacttttatgttttatgtccccaagaagatgatccgttcatcgagagagagctg
aaaaaagaagttgaaattgagtttagggaaggaaatccccttgattttatagagcctggg
agaagaaacgcaattatagtaaactcagttaaacgagccgttgatctgtttaacgaagcc
aaaaacaatccagaaatctggcctgaaagcgagagaattatgctgatccatggcaggatg
actccaagtcacaagcgggagcttatcaaacgcttaagagagtggacaaagaaggaaaat
ttcctcctcatcggaacacaggcagtcgaagccggcgttgacttttcagttgaccttatg
ataacggatagggcgcccataaattccctcctccagcgttttgggagagtggccagatat
ggcagtgacatgaaagctaatatatttgtccttgaagatgcaccttgtgggccatatcca
aaggataaagtcgaaaagactgtgaacttgatgaaggaacaccagatcctcccacgggtg
ccagacacatatcaggcaatagttactgaggttcacgggaaaaagccaatatctgtcaaa
aagaacgttaatagagagctcaagagaacgcttctcaagcttatgtcagatcctactaaa
agagcaccccatgttttaagctcgatagagcggttaacagctagtggcactccgatcatg
agaggtttcctaattccgctttcagtagggggagaagccgtgctgataagcccctccaag
ctggtggagctttactacagaggagtcgtggagataagaggttggaaggggaatatacgg
agcttaaacgatgcctacaacgtggcgaaatccgttgcactcggaaaaaatgttgaggtc
gtttttataggcgagtatgactgggagcgtggtatcccatga

DBGET integrated database retrieval system