Thermococcus kodakarensis: TK0528
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Entry
TK0528 CDS
T00226
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
tko
Thermococcus kodakarensis
Pathway
tko00260
Glycine, serine and threonine metabolism
tko00460
Cyanoamino acid metabolism
tko00630
Glyoxylate and dicarboxylate metabolism
tko00670
One carbon pool by folate
tko00680
Methane metabolism
tko01100
Metabolic pathways
tko01110
Biosynthesis of secondary metabolites
tko01120
Microbial metabolism in diverse environments
tko01200
Carbon metabolism
tko01230
Biosynthesis of amino acids
tko01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
tko00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
TK0528
09102 Energy metabolism
00680 Methane metabolism
TK0528
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
TK0528
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
TK0528
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
TK0528
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
TK0528
Enzymes [BR:
tko01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
TK0528
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
SelA
Cys_Met_Meta_PP
CheD
DegT_DnrJ_EryC1
Lactamase_B_3
Motif
Other DBs
NCBI-ProteinID:
BAD84717
UniProt:
Q5JF06
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All DBs
Position
453313..454608
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AA seq
431 aa
AA seq
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MAEGYREYRDKVLGFIEDHENWRKHTINLIASENVTSPSVTRAVASGFMHKYAEGWPKQR
YYQGCKYVDEVELIGVELFTKLFGSDFADLRPISGTNANQAVFFGLTQPGDKAIVLHTSH
GGHISHMPFGAAGMRGLEVHTWPFDNEEFNIDVDKAEKLIREVEPKIVVFGGSLFPFPHP
VKELAPVAKEVGAYVMYDGAHVLGLIAGKQFQDPLREGADIITASTHKTFPGPQGGVIIY
KRFGETEEIAKLQWAIFPGVLSNHHLHHMAGKVITAAEMLEYGEKYAAQIVKNAKALAEA
LAEEGFKVIGEDKGYTESHQVIVDVSDLHPAAGGWAAPLLEEAGIILNKNLLPWDPLEKV
NEPSGLRIGVQEMTRVGMMEDEMKEIARFIRRVLIDKEDPAKVRRDVYGFRAEYQKVYYS
FDHGLPLRLRE
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaggatatagagagtacagagacaaggttcttggctttattgaagaccacgag
aactggaggaagcacacgataaacctcatcgcgagcgaaaacgtgacttctccgagcgtt
accagggccgttgcctcaggttttatgcacaagtacgccgagggctggccgaagcagagg
tactatcagggctgcaagtacgttgacgaggttgagctcatcggtgttgagctcttcacc
aagctcttcggaagcgacttcgccgacctgagaccgatttctggaacaaacgccaaccag
gcggtcttcttcgggctcacccagccgggcgacaaggcgatagttcttcacaccagccac
ggcggacacataagccacatgcccttcggtgccgccggaatgaggggtcttgaagtccac
acctggcccttcgacaacgaggagttcaacatcgatgtcgacaaggccgagaagctcatc
cgcgaggtcgaacccaagatagtcgtcttcggcggttcgctcttcccgttcccgcaccct
gtcaaggagctcgctccggtcgccaaagaggttggcgcctacgtcatgtacgacggtgcc
cacgtcctcggtctcatagctggaaagcagttccaggacccgctccgcgagggagccgac
ataatcacggcctcaactcacaagaccttccctgggccgcagggcggtgtcatcatttac
aagcgcttcggcgagacggaagagatagccaagctccagtgggccatcttcccgggtgtc
ctcagcaaccaccacctccaccacatggcgggtaaggtaatcaccgccgccgagatgctc
gagtacggtgagaagtacgcggcccagatagtcaagaacgccaaggcccttgccgaagcc
ctggcggaggaaggcttcaaggtcatcggcgaggacaagggctacaccgagagccaccag
gtcatcgttgacgtttcagacctccaccctgcagctggaggatgggcggccccgctgctt
gaagaggccggcataatcctcaacaagaacctcctcccgtgggacccgcttgagaaggtc
aacgagccgagcggccttaggattggagtccaggagatgaccagggttggaatgatggag
gatgagatgaaggagatagcaaggttcatcaggcgcgtcctcatagacaaggaagaccct
gccaaggtcaggagagacgtctacggcttccgcgccgagtaccagaaggtttactactcc
ttcgaccacgggctcccgctcaggctcagggagtaa
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