Thermococcus kodakarensis: TK0539
Help
Entry
TK0539 CDS
T00226
Name
(GenBank) predicted transcription regulator, containing DNA-binding HTH domain
KO
K07728
putative transcriptional regulator
Organism
tko
Thermococcus kodakarensis
Brite
KEGG Orthology (KO) [BR:
tko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tko03000
]
TK0539
Transcription factors [BR:
tko03000
]
Prokaryotic type
Helix-turn-helix
Other families
TK0539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_31
HTH_19
HTH_17
HTH_26
HTH_11
HTH_25
HTH_8
Hjc
HTH_24
MerR
HTH_23
Xre-like-HTH
HTH_DeoR
HTH_7
HTH_28
GP3_package
Motif
Other DBs
NCBI-ProteinID:
BAD84728
UniProt:
Q5JF28
LinkDB
All DBs
Position
459725..460681
Genome browser
AA seq
318 aa
AA seq
DB search
MERERLIKTVEAILRGAGYRVARLDLKGSCFDLVASRLFLLLFIKATVNIDTITEEQAED
LKRLAKFFKASPLIVGLRSKSGELEEGVVYERFGIYALRPETLYDALLNNELPAVFAERG
GLYVRINGELLRELREKHGYSVNELAQLLGVSRKSLLNYERGEQAVSLDVAIQLEEIFDE
ALAEPIDILRAKVEADLNVKPETPLEREVFERLKKLGLGLVKVKKAPFNAISTEDDIRLL
TGIDERKTRSTIKRAEMVAEVGRIVNSGGVFILEKTKAEVVSEVPLIPKESLEEVKDADE
LIELIDKLKKEIKEKLFS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggaaagggagaggctcataaagaccgttgaagcgatacttagaggcgcagggtaccgc
gttgccaggttagaccttaaagggtcgtgctttgacctagtggcgagcaggctctttctc
ctgctttttataaaggctaccgtgaacatcgacacgataacagaagagcaggcggaggac
ttaaagcgcctcgccaagttcttcaaggcttctccgcttattgttgggctaaggagcaag
agcggcgagcttgaagagggtgtggtgtacgagcgctttggaatttatgccctccgcccc
gagaccctctacgatgctctcctgaacaacgaactgcccgctgttttcgcggagcgcggt
ggtctgtacgtcaggataaacggagagctgttgagagaactcagggaaaagcacggctat
tctgtaaatgaactggcacagctgctcggcgtgtctagaaagagcctgctcaactacgag
cgcggcgaacaggcagtttcgcttgatgttgccatccagcttgaagagatatttgatgag
gccctcgcggagccgatagacatcctgagggccaaagttgaagccgacctcaacgttaag
cctgaaacgccgctcgagcgcgaggtctttgagaggctcaagaaactcggcctgggcctt
gtgaaggtgaagaaagcgcccttcaacgcgatttcaactgaagacgacatacgccttctc
acgggtatagatgaaaggaagacacgctccaccataaaacgcgccgagatggtggcggag
gtcggcagaatagttaacagcgggggcgttttcatactggagaagactaaggctgaagtc
gtttcagaagttccgctcatccccaaggagagccttgaggaagttaaagacgcagatgag
cttatagaactcatcgacaagctgaagaaggagataaaggaaaagctcttcagctga
DBGET
integrated database retrieval system
