KEGG   Thermococcus kodakarensis: TK0582
Entry
TK0582            CDS       T00226                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
tko  Thermococcus kodakarensis
Pathway
tko03030  DNA replication
tko03410  Base excision repair
tko03420  Nucleotide excision repair
tko03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tko00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TK0582
   03410 Base excision repair
    TK0582
   03420 Nucleotide excision repair
    TK0582
   03430 Mismatch repair
    TK0582
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tko03032]
    TK0582
   03400 DNA repair and recombination proteins [BR:tko03400]
    TK0582
DNA replication proteins [BR:tko03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    TK0582
DNA repair and recombination proteins [BR:tko03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     TK0582
   MMR (mismatch excision repair)
    Other MMR factors
     TK0582
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    TK0582
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad1 Rad9
Other DBs
NCBI-ProteinID: BAD84771
UniProt: Q5JFD3
Structure
LinkDB
Position
complement(501665..502426)
AA seq 253 aa
MTFEIVFDSAREFESLIATLEKFFDEAVFQVNMEGIQMRAIDPSRVVLVDLNLPEMLFSK
YSVESEEAIAFDLKRFLKVLKLARSRDTLVLRKGGENFLEVGLLGDENTWFKLPLIDANT
PEIEIPSLPWTVKAVVLAGALKRAVKAAKLVSDSIYFMATPEKLTFKAEGNDSEVRTVLT
MEDPGLLDLEHKMTKAKSAYGVAYLEDILRSLADADEVIIRFGFDIPLLLKYMVRDAGEV
SFLIAPRVEEGRS
NT seq 762 nt   +upstreamnt  +downstreamnt
atgacttttgagattgtgtttgattcggctagagagtttgagagcctgatagccacgctt
gagaagttcttcgatgaggcagtattccaggttaacatggaaggaattcagatgcgtgct
atagacccgagcagggtcgtcctcgttgacctcaaccttccagaaatgctcttctccaag
tactccgtcgagagtgaggaagcgatagcctttgatctaaagcgtttcctgaaggttctt
aagcttgcaaggagcagggatacgcttgttctccgcaagggtggagagaatttcctcgag
gtcggcttgctcggtgatgagaacacgtggttcaagctccctctaatagacgccaatact
cctgagattgaaattccgagcctgccatggactgtcaaggccgtcgtgctcgctggagct
ctgaaaagagccgttaaggccgcaaagcttgtctccgactcaatctacttcatggctacc
cctgagaaattgactttcaaggcggagggcaacgactccgaggttagaaccgttctcact
atggaggatccaggtctccttgacttggagcacaagatgacaaaggcgaagagtgcgtac
ggggttgcatatctcgaggacatcctaaggagtctcgctgatgctgatgaagtcatcatt
cggtttggctttgacataccactgcttctgaagtacatggttcgggatgccggtgaggtc
agcttcctgatcgcaccaagagtcgaggagggtcgctcatga

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