KEGG   Thermococcus kodakarensis: TK0653
Entry
TK0653            CDS       T00226                                 
Name
(GenBank) signal recognition particle GTPase
  KO
K03110  fused signal recognition particle receptor
Organism
tko  Thermococcus kodakarensis
Pathway
tko02024  Quorum sensing
tko03060  Protein export
tko03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:tko00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    TK0653
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    TK0653
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    TK0653
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tko02044]
    TK0653
Secretion system [BR:tko02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   TK0653
SSDB
Motif
Pfam: SRP54 SRP54_N AAA_30 AAA_22 AAA_17 MobB MeaB nSTAND3 Fe-ADH Zeta_toxin AAA_19 AAA_33 CbiA YqeC cobW VirC1 Peripla_BP_4 MMR_HSR1 ABC_tran KdpD APS_kinase Thymidylate_kin KAP_NTPase CLP1_P nSTAND_NTPase7 AAA_28 NTPase_1 ResIII CbiJ LytR_C KTI12 ATP_bind_1 6PF2K DUF2855 NB-ARC DUF5693 Peripla_BP_6 AAA YkcB_C Glyco_transf_4 DUF6825 DO-GTPase2 LpxK AAA_16 Senescence Pox_A32 AAA_31 FACT-Spt16_Nlob AAA_15 CAP12-PCTIR_TIR
Other DBs
NCBI-ProteinID: BAD84842
UniProt: Q5JF74
LinkDB
Position
complement(555790..556818)
AA seq 342 aa
MFGKLREKLKKFTKQVEEKIEEEEKAVEAPMAGEEIQKAVQESTETEGEKPGFLGRLLQV
EIKEKDIEDALDELEIELLEADVALETVEALREKIKEKLVGRKVRIGTNKGKIIEEALKE
AILEILTPEKKIDLLQMIKSKEDKPFVIAFVGFNGSGKTTTIAKLAHWLKKNGFSVVIAA
SDTFRAGAIEQLEEHAKRVGVKVIKHDYGADPAAVAYDAIQHAKARGIDVVLIDTAGRNE
LNRNLMDEMKKIARVTKPDLVIFVGDSLGGNAVVEQAKQFNEAVRIDGVILTKLDADARG
GAALSISHAIGAPILFVGVGQGYEDLRPFDEKWFVERIFGED
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgttcggaaagctaagggagaagctcaaaaagttcacaaagcaggttgaggagaaaata
gaagaggaagaaaaggccgttgaggctccaatggctggggaagaaatacagaaggctgtt
caggagtccacagagacagagggagaaaaacccggattccttggaagactcctccaggtg
gagataaaggagaaggacatcgaagatgccctcgacgagcttgaaattgaactccttgag
gccgatgttgcccttgagaccgtcgaagccctccgcgagaagataaaggaaaagctcgtt
ggaagaaaggtcaggataggcaccaacaagggcaagattatagaggaagccctgaaagag
gctattctcgaaatcttgactcccgaaaagaaaatcgacttgctccagatgataaaatcg
aaagaggataagcccttcgtcatagccttcgtcggcttcaacggctctggaaaaacaacc
accatagcgaagctcgcccactggctcaagaagaacgggttcagcgttgtaatagctgcc
agcgacaccttcagggcgggtgctatagaacagcttgaagagcacgcgaagagggttggc
gtcaaggtcataaagcacgactacggcgcagaccctgccgcggttgcctacgacgccatc
cagcacgcaaaggcgaggggaattgatgtcgtcctgatagatacggctggaagaaacgaa
ctgaacaggaacctcatggacgagatgaagaagatagcaagggtcaccaagcccgatctg
gtgatattcgttggggactcgctcggaggcaacgccgttgtcgaacaggccaagcagttc
aacgaggccgtgaggatagacggagttatactcaccaagctcgatgcagacgcgagggga
ggggcagccttgagcataagccatgcaatcggcgcgcccatactcttcgtcggcgttgga
cagggctacgaagacctcagaccctttgatgagaagtggttcgtggagaggattttcggg
gaggactga

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