Thermococcus kodakarensis: TK0876
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Entry
TK0876 CDS
T00226
Name
(GenBank) ribosome biogenesis protein Nep1p homolog, suppressor Mra1 family
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
tko
Thermococcus kodakarensis
Pathway
tko03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tko00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TK0876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tko03009
]
TK0876
Enzymes [BR:
tko01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
TK0876
Ribosome biogenesis [BR:
tko03009
]
Eukaryotic type
90S particles
Other 90S particles
TK0876
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-ProteinID:
BAD85065
UniProt:
Q5JI44
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All DBs
Position
763403..764065
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AA seq
220 aa
AA seq
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MLHLIIAEAELELVPESIRDHPAVVNYARRRKKRPEEAILDSTYHHAALKKLPDGDRRGR
PDIVHICLLNALESIANKEGFLRVYVHTRNDEVIHIKPETRLPRNYNRFLGLMESLFKKG
AVPEGLELLRIEKKPLESLIEDINPDTVFIMHEEGELIRPRSFGEILASHQNPVVVVGGF
PHGDFMRPIEGTKVSLYREPLMAWTVVSEVIVNFEAALGL
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgcttcacctgataatagctgaggcggagcttgagctggttccggagagcattagagac
catccggcagtcgtgaactacgcaagaagacggaagaagaggccagaagaggcgatactg
gacagcacctaccaccacgcggcactgaagaagctcccggacggcgacaggcgcggaagg
ccagatatagtccacatctgcctcctcaacgccctcgaaagtatagcgaacaaagagggc
ttcctgcgggtctatgtccacacgagaaacgatgaagtgatacacataaagcccgaaaca
cggcttccaaggaactacaacagattcctgggtctcatggagagcctctttaagaagggt
gccgttccggaagggctagagcttttgaggatagaaaagaaaccgcttgaatctttgatt
gaagatataaaccctgatacggtcttcataatgcacgaggaaggggagctaataaggccc
aggtcgttcggagagatcttggcttcccaccagaaccccgtcgttgtagtcggaggtttt
ccccacggcgacttcatgaggcctattgaggggacgaaagtcagcctgtatcgtgagcct
ctaatggcatggacggtagtaagcgaagtcatcgtaaactttgaggctgccctgggactt
tga
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