Thermococcus kodakarensis: TK1079
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Entry
TK1079 CDS
T00226
Name
(GenBank) transcription termination-antitermination factor, NusA homolog
KO
K02600
transcription termination/antitermination protein NusA
Organism
tko
Thermococcus kodakarensis
Brite
KEGG Orthology (KO) [BR:
tko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tko03021
]
TK1079
03009 Ribosome biogenesis [BR:
tko03009
]
TK1079
Transcription machinery [BR:
tko03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
TK1079
Ribosome biogenesis [BR:
tko03009
]
Prokaryotic type
rRNA transcription factors
TK1079
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH_2
KH_KhpA-B
KH_5
KH_1
KH_NusA_C
PfkB
BFN_dom
Nic96
Motif
Other DBs
NCBI-ProteinID:
BAD85268
UniProt:
Q5JE36
LinkDB
All DBs
Position
complement(944942..945379)
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AA seq
145 aa
AA seq
DB search
MPLKLNTDQIKYIALFESMTGATVLDCLIDTNRNRLIYVIKKGEMGLALGKKGANVKRVQ
GMLGKEIELIEHSENPEEFLRNIYKSLGVKVKKVHITEKRDGKKVALLDVGPRDKPRAIG
RGGQNINLVKELMERHHGIEDVVII
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgccactcaagctcaacactgatcagatcaagtacatagcactcttcgagagcatgacg
ggagccacagtgctcgactgcctcatagacacgaacaggaacaggctcatatacgtcatc
aagaagggtgagatgggcctcgccctcgggaagaagggagccaacgtcaagagagtccag
ggcatgctcgggaaggagatagagctcatcgagcactccgagaaccccgaagagttcctg
aggaacatttataagagccttggagttaaggttaaaaaggtccacatcaccgaaaagagg
gatggtaagaaggtcgccctcctcgatgtcggcccgcgcgacaagccgagggccatagga
aggggcggccagaacatcaacctcgttaaggagttgatggagagacaccacggcattgag
gatgtcgtgataatctga
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