Thermococcus kodakarensis: TK1081
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Entry
TK1081 CDS
T00226
Name
(GenBank) DNA-directed RNA polymerase, subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
tko
Thermococcus kodakarensis
Pathway
tko03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tko00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TK1081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tko03021
]
TK1081
Enzymes [BR:
tko01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TK1081
Transcription machinery [BR:
tko03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
TK1081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
SMC_ScpA
A_deaminase
Motif
Other DBs
NCBI-ProteinID:
BAD85270
UniProt:
Q5JE34
Structure
PDB
PDBj
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All DBs
Position
complement(945701..946876)
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AA seq
391 aa
AA seq
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MVAEKTIKSMVSKAELPDNIKEELYAKLIEYNEKYKLKKDEIQAIIDETVREYQKALIEP
GEAVGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTLGLPRIIEIVDARKNPSTPIMTVYL
DEEHRYDRDKALEVARRIEGTTLENLAREETIDILNMEYVVEIDPERLEKAGLDMEKVVR
KLTGSFKSAEFEAEGYTLVVRPKKVTKLSDLRKIAEKVKKHRLKGLSGVGKTIIRKEGDE
YVIYTEGSNFKQVLKVPGVDPTRTRTNNIWEIAEVLGIEAARNAIIDEIVSTMREQGLEV
DVRHIMLVADMMTLDGVIRPIGRHGIVGEKASVLARAAFEITTQHLFAAAERGEVDPLNG
VVENVLIGQPVPVGTGIVKLAMSLPLRPKRE
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcagagaagaccatcaagagcatggtcagcaaggcagagctcccggacaacatc
aaggaagagctctacgctaagcttatcgagtataacgagaagtacaagctcaagaaggac
gagattcaggcgataatagacgagacagtcagggaataccagaaagccctcatagaacca
ggagaggccgtcggaacggtggcggcccagtccataggtgagccttcgacccagatgacc
ctcaacaccttccactacgcgggtgtcgctgagatcaacgttaccctcggtctcccgaga
atcatcgagattgttgatgccagaaagaacccttcaacgccgatcatgaccgtttacctt
gacgaggagcaccgctacgacagggacaaggcccttgaggtcgccaggaggattgaggga
acgacccttgagaacctggccagggaggagacgatagacatactcaacatggagtacgtg
gtcgagatcgaccccgagaggctggagaaggccggcctcgacatggagaaggttgtaagg
aagctcactggctcattcaagagcgctgagttcgaagctgaagggtacacgctcgtcgtg
aggcccaagaaggtaacgaagctctccgacctgagaaagattgccgaaaaggttaaaaag
caccgccttaagggtctctctggcgttgggaagaccatcataaggaaggaaggcgacgag
tacgtgatatacaccgagggctcgaacttcaagcaggtcctcaaggttccaggcgttgac
ccaacgaggacgaggaccaacaatatctgggagatcgcagaagtgctcggcattgaggct
gccagaaacgccatcatagacgaaatcgtcagcacgatgcgcgagcagggtctcgaggtt
gatgtcaggcacatcatgctcgtcgccgatatgatgacgctcgacggcgtcataagacca
atcggtaggcacggtatagttggtgagaaggcgagcgtcttagctagggccgccttcgag
ataaccacccagcacctgtttgccgcggctgagaggggagaggtggatcctctcaacggt
gtggttgagaacgtcctcataggccagcccgtgccagtcggtacgggaatcgtcaagctg
gccatgagtctccccctgagaccgaaaagggagtag
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