Thermococcus kodakarensis: TK1305
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Entry
TK1305 CDS
T00226
Name
(GenBank) translation initiation factor IF-2
KO
K03243
translation initiation factor 5B
Organism
tko
Thermococcus kodakarensis
Brite
KEGG Orthology (KO) [BR:
tko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
tko03012
]
TK1305
Translation factors [BR:
tko03012
]
Eukaryotic type
Initiation factors
eIF-5
TK1305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D4
Intein_splicing
IF-2
LAGLIDADG_3
GTP_EFTU_D2
MMR_HSR1
EF-G_D2
LAGLIDADG_WhiA
ATP_bind_1
RPAP1_N
Motif
Other DBs
NCBI-ProteinID:
BAD85494
UniProt:
Q5JGR9
LinkDB
All DBs
Position
complement(1151028..1154462)
Genome browser
AA seq
1144 aa
AA seq
DB search
MTKRIRQPIIAVLGHVDHGKCLLPDEKVILPEHGPITLKGLFDLAKETVVADNEKEIRKL
GAKLTIVGEDGRLRVLESPYVWKVRHRGKMLRVKLKNWHSVSVTPEHPFLTTRGWVRADQ
LKPGDYVAVPRVIHGNESDERFVSFVYEKLKNDELIAKLRGEVLSKISSEFKGDRAYKVE
RNVFRWEDIERLNLWDEVERVAFTPRMHRSGKPLHYVKLPRSPEEWEAFFYFAGVMFGDG
SQDKIANNDVEVYEELKKLSVLGVAVKRVERTTSYEIELTNGKNALLRLLRVLFEYPERQ
KAKSIRVPRILFIAPRKYVSRFLRGYFDADGHVSLKDARIEVTSASQEFLEDLSLLLLRF
GIVSKIYRSDYTTLVISGRRNLDLFRRYIGFSVKNKAEALEKAIKKSRRSESYPIFEELK
RLRLLFGFTRTELNSNVPFYGKYESEEAPSYETLMRILDAIEKGSINLDKKIAVLEGRIR
DHNYIKAFEKDGLIKDGKLTELGRELLEVWRNREFDSSDVDYIRNLAENLVFIPVEDIEE
FEYEGYVYDVTTETHNFVANGILVHNTTLLDRIRHTNVAGKEAGGITQHIGATEVPIDVV
KQLAGPLIKLWKGEIKLPGLLFIDTPGHEAFTSLRARGGSLADLAVLVVDINEGFQPQTI
ESIEILRRYRTPFIVAANKIDRIKGWVIEEDEPFLVNIKKQDQRAIQELETKLWELIGKF
YEMGFNANRFDRVQDFTRELAIVPISAKYGIGIPELLVLIAGLSQKYLEEKLKIEVEGPA
RGTILEVREEVGLGTTIDVIIYDGTLRKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDP
RFRFDQVDEVTAAAGVKIAAPGLEEALAGSPVIAARSEEEIEKAKQEILSQIQSVVINTG
KIGVIVKADTLGSLEALSKELQEKGIPIRKADVGNISKTDVMEALSVKEEEPKYGVVLGF
NVKVNEDAEEVANAKGVPIFVGNIIYKLIEDYEAWVKEEEEKRKRELLKNVTFPGVIRLY
PDERYVFRRSKPAIVGVEVLEGRIRPGVTLIKETGEKVGVIKSIKNKNDFVQEAKKGDAV
AIAIEGAIVGRHIHPGETLYVDLSKNDVIILAKQLKDELEETDIKALKMTAKVKAKEDPF
WRAV
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagagaattagacagccaatcatcgcggttctcggccacgttgaccacggcaag
tgcctgttgccagatgagaaagtgatactgcccgagcacggcccgataacacttaaggga
ctgttcgatttagctaaagaaaccgtagtcgctgacaacgagaaggaaatcagaaagctc
ggagcgaaactcacaatagtgggcgaagatggaaggttaagagttctcgaaagcccgtac
gtctggaaggtgaggcataggggcaaaatgctcagagtcaagctcaagaactggcactcg
gtttcggttacgccagaacatcctttcctgacaacgaggggatgggtacgcgcagaccag
ctcaagccgggggactacgtcgccgttccgagggtaatccacgggaacgagagtgatgag
agattcgtctccttcgtttatgagaagctcaagaacgatgagctaatcgcaaagctcagg
ggagaagtactcagcaaaatctccagcgagtttaagggcgacagggcgtacaaagttgag
aggaacgttttcaggtgggaggacatagagaggctcaacctgtgggacgaagtggaaagg
gtggccttcaccccaaggatgcaccgctcagggaagccgctccactacgtaaagcttccg
cgctctccggaggaatgggaggcgttcttctacttcgcgggcgttatgttcggagacgga
agccaggacaagatagccaacaacgatgttgaggtctacgaggagctgaagaagctttca
gtcctcggggtggcagtgaagagagtggagcgcaccacatcttacgagattgaactcacc
aacggcaaaaacgccctgctgaggcttctcagagtcctgtttgaataccccgagagacag
aaggcgaagagcattagagtcccaaggatactcttcattgcccccagaaagtacgtctcc
cgcttcctcagggggtactttgatgccgacgggcacgtcagccttaaggacgcgaggatt
gaagtgacgagcgcatcccaggagttccttgaggacctttcattgctccttctccgcttt
ggaatagtctcaaagatctaccgctcggactacacgaccctcgttatatctggcaggaga
aacctcgacctattcagaaggtacataggtttctcggtgaagaacaaggcggaggctctt
gaaaaggcaattaaaaagagcaggaggagcgaaagctatccgattttcgaggaactgaag
cgcctgaggctcctcttcggcttcacaaggacggagcttaactcaaacgttccgttctac
ggaaaatacgaatccgaagaagccccgagctacgagactctaatgagaattctcgacgcc
atcgagaaaggctcaattaacctcgacaaaaaaatcgccgtcctcgagggtaggataagg
gatcacaactacattaaagccttcgaaaaggatgggctgataaaggacggaaagctcaca
gagcttggaagagagctcctcgaagtctggcgcaacagggagtttgactcaagtgacgtt
gactacatcaggaacctcgctgaaaacctcgtgttcattccggttgaggacatagaagag
ttcgaatacgagggttacgtctatgatgtcacaactgagacccacaacttcgtggccaac
ggcatcctcgtccacaacaccaccctcctcgaccgcatcaggcacacgaacgtggctgga
aaggaagcggggggaataacccagcacataggtgcaactgaggttccgatagatgttgtc
aaacagctcgccggcccgctcatcaagctctggaagggcgagataaagctccccggactg
ctcttcatcgacactcccggccacgaggcctttacgagcctcagggctaggggaggaagc
ctcgccgatttggcggtcctcgttgttgacataaacgagggcttccagccgcagacgata
gagagcatcgaaatcctgaggcggtatagaacgccctttatagttgccgccaacaagata
gacaggataaagggctgggtcatcgaggaggacgagcctttcctcgtcaacattaagaag
caggatcagagagcaatacaggagctggaaaccaagctctgggaactgataggaaagttc
tacgagatgggattcaacgccaaccgcttcgaccgcgttcaggacttcaccagggagctt
gcgatcgtcccaatctcagccaagtacggcataggcattccagaacttctcgtcctcata
gcaggcctctcccagaagtaccttgaggagaagctgaagatagaggttgaaggccccgca
cgcggtaccatcctcgaggtcagagaagaggttggcctcgggacaaccatcgacgtcatc
atctacgatggaactctgagaaaggacgacacgatagtggttggcggaaaggacaaggcg
atagttaccaaaatccgcgcgctcctgaagccaaaacccctcgacgagatcagggacccg
aggttccgcttcgaccaggttgatgaggtaacagcggcggcgggtgtcaagatagcggct
ccgggccttgaggaggcgttagctggttcaccagtcatagcggcgcgctccgaggaggag
attgaaaaggcaaagcaggagatactcagccagattcagagcgtcgtcataaacaccggc
aagatcggtgtcatagtcaaggccgacacacttggaagccttgaggccctcagcaaggag
ctccaggagaagggaatccccatcagaaaggcagatgttggcaacatcagcaagaccgac
gttatggaggccctgagcgttaaggaggaggagccgaagtacggggtcgtcctcggcttt
aacgtcaaggtcaacgaagatgcagaagaggttgcgaacgcaaagggcgtcccaatcttc
gttggcaacattatctacaagctcatcgaggactacgaggcctgggtgaaggaagaggag
gagaagaggaagcgcgagctcctcaagaacgtcaccttcccaggcgttatcaggctctac
ccggacgagcgctacgtcttcagaaggagcaagccggccatagtcggcgtcgaagtcctc
gagggcaggataaggccgggtgtgactctgatcaaggagaccggcgagaaggtcggcgtc
atcaagtcgataaagaacaagaacgacttcgtccaggaggcgaagaagggggacgcggtg
gcaatagccatcgagggcgcgatagtcggcaggcacatacaccccggggagaccctctac
gttgacctcagcaagaacgacgtcataattctcgccaagcagctcaaggacgagcttgaa
gagacagacataaaggccctcaagatgacggcaaaggtaaaggcgaaagaagacccgttc
tggagggcggtctaa
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integrated database retrieval system
