Thermococcus kodakarensis: TK1509
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Entry
TK1509 CDS
T00226
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tko
Thermococcus kodakarensis
Brite
KEGG Orthology (KO) [BR:
tko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tko03016
]
TK1509
Enzymes [BR:
tko01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
TK1509
Transfer RNA biogenesis [BR:
tko03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TK1509
Prokaryotic type
TK1509
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
PUA
DKCLD
Pus10_C
UPF0113
SIR2_2
Motif
Other DBs
NCBI-ProteinID:
BAD85698
UniProt:
Q5JJE8
LinkDB
All DBs
Position
complement(1330480..1331496)
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AA seq
338 aa
AA seq
DB search
MARDEVRRILPADIKREVVVKDEKAETNPKWGFPPEKRPIEMHIQFGIINLDKPPGPTSH
EVVAWVKRILNLNKAGHGGTLDPKVSGVLPVALERATRVVQALLPAGKEYVALMHLHGDV
PEDKILAVMREFQGEIIQRPPLRSAVKRRLRTRKVYYIDVLEIEGRDVLFRVGVEAGTYI
RSLIHHIGLALGVGAHMAELRRTRSGPFKEDETLVTLHDLVDYYHFWKEDGVEEYFRKAI
QPMEKAVEHLPKVWIRDSAVAAVTHGADLAVPGVVKLHKGIKKGDLVAIMTLKDELVALG
KAMMTTGEMLQKSKGIAVDVDKVFMPRDWYPKLWKEKE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggcgagggacgaagtgaggaggatccttcccgctgacatcaagagggaagtggttgtg
aaggacgagaaggccgagacgaatccgaagtggggctttccgccggagaaacggccaatc
gagatgcacatccagttcggcataatcaacctcgacaagccgcccgggccgacgagccac
gaggtcgtcgcctgggtcaagaggatactgaaccttaacaaggcaggacacggtggaacg
ctagatccgaaggtcagtggagtccttccggttgccctggagagagcaacaagggttgtg
caggcccttctgccagctggaaaggagtacgtggctttaatgcacctccacggcgacgtt
cccgaggacaaaatactcgccgttatgagggagttccagggggagataatccagaggccg
cccctgaggagtgccgtcaagagacgccttaggacgaggaaggtctactacatagacgtg
ctggagatagaaggtagggacgttctcttcagggttggagtcgaggccggaacctacatc
cgttcgctcatccaccacattggccttgcccttggggtcggcgcccacatggccgaactt
agaaggaccagaagtggccccttcaaggaggatgagaccctcgtgaccctccatgacctt
gtggactactaccacttctggaaggaggacggggttgaggagtacttcaggaaggcaatc
cagccgatggagaaggcagtggaacatctgcccaaggtctggataagggactccgcagtt
gccgctgttactcacggcgctgatttagcagttcccggcgtagtcaagctccacaagggc
ataaagaagggagacctcgtcgcaataatgaccctcaaggacgagcttgttgcactgggc
aaagccatgatgacaaccggggagatgctccagaagagcaagggcatagcggtcgatgtg
gacaaagtcttcatgccaagggactggtatcccaagctgtggaaggagaaagagtga
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