Thermococcus kodakarensis: TK1620
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Entry
TK1620 CDS
T00226
Name
(GenBank) DNA replication licensing factor, MCM2/3/5 family
KO
K10726
replicative DNA helicase Mcm [EC:
5.6.2.3
]
Organism
tko
Thermococcus kodakarensis
Pathway
tko03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
tko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TK1620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tko03032
]
TK1620
Enzymes [BR:
tko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
TK1620
DNA replication proteins [BR:
tko03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (archaeal)
TK1620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
Intein_splicing
MCM_OB
MCM_lid
MCM_N
WHD_MCM_arc
AAA_5
AAA_16
Zn_ribbon_8
HypA
Hint
HVO_2753_ZBP
TackOD1
Motif
Other DBs
NCBI-ProteinID:
BAD85809
UniProt:
Q5JIT1
Structure
PDB
PDBj
LinkDB
All DBs
Position
1424598..1428071
Genome browser
AA seq
1157 aa
AA seq
DB search
MDREEMIARFAKFLREYVDDEGNEVYINRLKDLLTVTPKRSLAIDWAHLNSFDPELADEL
LNNPEEAIASAEDAIQIVLREPPLLVEREFKVHARFYNLPKTLLVKELGSEHINKLIQVE
GIITRVSEVKPFVEKAVFVCRDCGNEMVRLQRPYENLVKPAKCDACGSRNIELDVDKSRF
LNFQSFRLQDRPESLKGGQMPRFVDAILLDDLVDAALPGDRVLVTGVLRVILEQREKRPI
FKKILEVNHIEQLSKEIEELEISPEDEQKIRELAKRKDIVDAIVDSIAPAIWGHRIVKKG
IALALFGGVQRTLPDGTKLRGESHVLLVGDPGVAKSQLLRYVANLAPRAIYTSGKSSSAA
GLCVAPDSIIKTNLGQFKIGELVEKAIPEKVQDYKSVNAEKLGLYIKTLDGDMRVLRLWK
LRAPEKLIRIEGDGLSITVTPETKLLTPNGWVEARNVDGEVVTENGPVKVSKQEIESPHD
YVYDLTVEGSHSFIANGFVVHNTAAAVRDEFTGSWVLEAGVLVLADGGFALIDEFDKMSD
RDRSAIHEALEQQSYHHDFELLLADGRKVKIGELVDKLIEKNRDRVILGKDTEILPVEDI
ELLAYDLEKREIVKVKADRVSRHKAPERFIKLRFSNGREITVTPEHPVMVWENGEITEKP
AEKITPGDIALGVLRYPIQVDGKFKERYRDMREAEDYQDYLYSRGVVSKIKRTGIYFTVE
KARRALPRELVKPLINAGKILRVTQTPKERASFNQKLVRENIIEGYLQRIIERMDELERL
SREDPAKALELLPKTQLYYKYGITYGKLKKLAEARNSWAEGIIQSAVAERISLAKRELEE
FFKWWNANVNFLKVKCVEEIKNDRWEWVYDVTVEPHHLFVSHGLVLHNTISISKAGITAT
LNSRTTVIAAANPKFGRFNRHKSLPEQLDLPPTLLSRFDLIFLLLDEPDEKVDASIAEHI
LKVRRGEAEAVTPKIPYDLLKKYIAYARKNVHPVLSREAMEEIKRYYVKMRKGLRRGDED
GVQPIPITARQLEALIRLSEAHARMRLSETVTREDARAAIEIIEAMMKTIAVDEEGNLDV
SILEVGKSSKKINKIEKLVDIIKSLESEGEFGAPEEKVIEAAKQAGIGTKADIEKLLNEL
KSDGRVYEPRAGFYRVI
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggacagggaagagatgatagcacgctttgccaagtttctgcgggagtacgttgacgat
gagggcaacgaggtttacataaaccgcctcaaagacctcctcacggtcacaccaaagcgc
tcgctggcaatcgactgggcacaccttaactccttcgatcccgagcttgccgacgaactc
ttaaacaacccggaagaggccatagcgagtgccgaggatgccatccagatagtcctaagg
gagccgcctctcctcgtggagagggagtttaaagtccacgcccgcttctacaaccttccg
aagaccctcctcgtcaaggagctcggaagcgagcacataaacaagctcatccaggtagag
ggaataatcacgcgtgtgagcgaggtcaagcccttcgttgagaaggccgttttcgtgtgc
cgtgactgcggcaacgagatggtgagacttcagagaccctacgagaacctcgttaagccg
gccaagtgcgacgcctgcggaagcagaaacatagagcttgacgttgacaagagccgcttc
ctcaacttccagagcttccgccttcaggacaggccagagagcctcaagggcggccagatg
ccgcgcttcgttgatgcaatactccttgatgacctcgtggatgccgcccttcccggtgac
agggttctcgttacgggcgttctgagggtcatcctggaacagagggagaagaggcccata
ttcaagaagattcttgaggtaaaccacattgaacagctcagcaaggagatagaggagctg
gaaatctcaccggaagacgagcagaagataagggaactggcaaagaggaaggacatcgtt
gatgccatcgttgattcgatagcccccgccatctggggacacaggatagtcaagaagggg
atagctctggcactcttcggtggcgtccagaggactctcccagacggaacgaagctgagg
ggagaaagccacgttcttttggttggagatcctggagtagccaagagccagctcctccgt
tacgtcgccaatctggctccaagggctatttacacgagcgggaagagttcatcggcggcg
ggcctatgtgttgcaccggattcaataatcaaaacgaatcttggacagttcaaaatagga
gagctggttgaaaaggccataccagaaaaagttcaggactacaagagcgttaatgccgaa
aagctcggactctacattaaaacactggatggtgatatgagagtccttagactgtggaag
ctcagagccccagagaagctgataagaatagaaggagacggattgagtattacagtgaca
cccgagaccaagctcctgactcccaacggatgggtagaggccagaaacgtcgatggagaa
gtcgtcactgaaaatggcccagtcaaggtctccaaacaggaaattgaatctccccacgat
tacgtctacgacctcaccgttgaaggttctcacagcttcatagcaaacggtttcgtcgtc
cacaacactgcagcagccgtccgcgatgagttcacgggctcctgggtgctggaagcgggt
gttttggttctcgccgatggcggattcgccctaattgacgagttcgacaagatgagcgac
cgcgacaggagcgcgatacacgaagcgctggagcagcagagctaccaccacgactttgag
ctcctcttagctgacggcaggaaggtaaagataggagagctcgttgataagctcatcgag
aagaaccgcgatagggtgatactcggcaaggacacggagatacttcccgttgaggacatc
gagcttctggcttacgatctcgagaagagggagatagtaaaggtcaaagcagacagggtt
agcaggcacaaggccccagagaggttcataaaactccgcttctcgaacggcagggagatt
actgtaacgcccgagcacccagttatggtgtgggagaacggggagataaccgagaagccc
gccgagaagatcacacccggggacattgctcttggcgttctcaggtatcccattcaagtg
gatggaaaatttaaagaacgctacagagacatgagagaagccgaagattaccaggattat
ctctactctcgaggagtggtctcgaagatcaagagaactggcatatacttcactgttgaa
aaggccaggagagcccttccaagggagcttgtaaaaccgctgatcaatgcaggcaagata
ctccgagtaacacagacaccaaaagagcgcgccagcttcaatcaaaagctcgtgagggaa
aacatcatcgaaggttatcttcagaggattatagaaaggatggatgagcttgagaggctc
tccagagaagaccccgcgaaagcccttgaactcctgccaaagacccagctttactataag
tacgggataacgtacggaaaactcaaaaagctcgcagaagccagaaattcctgggcagag
ggcataatacagagtgcggttgcggagagaatctccctcgctaagagggagctggaagag
ttcttcaagtggtggaacgccaacgtgaacttcctgaaggtgaagtgcgtcgaggagatc
aaaaacgaccgctgggagtgggtctacgatgttacggttgagccgcatcatctattcgtt
tcccatggattagtcctccacaacacaatcagcatctccaaggccggaattaccgcaact
ctgaactcaagaacgaccgtcatagcggcggccaatccaaagttcggaaggttcaacaga
cacaagagcctcccggagcagctcgacctcccgccgacccttctcagccgtttcgacctg
atattcctgctcctcgacgagcccgacgagaaagtagacgccagcatagccgagcacatc
ctcaaggtcagaaggggcgaagctgaggcggtgacgcctaagataccctacgatctgctc
aagaagtacatagcatacgccagaaagaacgttcaccctgttctgagcagagaggcaatg
gaggaaataaaacgctactacgtcaaaatgagaaagggcctgcggagaggagatgaagac
ggcgtccagccaataccgattaccgctagacagcttgaggccctcatcaggctcagcgag
gcccacgcgaggatgagattgagcgaaacggtgacgagagaggacgcgagggcggcgata
gagataatcgaggcaatgatgaagacgatagccgttgacgaagagggcaaccttgacgtc
tcaatcctcgaagtcggcaagagttcaaagaagataaacaagatcgagaagcttgttgac
atcataaaatcccttgagagcgagggagagttcggagcgccggaggagaaagttatagag
gccgccaagcaggcagggataggaaccaaggcggacatcgagaagctcctcaacgagctg
aagagcgacggcagggtctatgaaccgagagctggattctaccgcgtcatctga
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